seasonal_shuffling • Science 44%

THz Image Explorer - An Interactive Cross-Platform Open-Source THz Image Analysis Tool • Science 93%

THz Image Explorer - An Interactive Cross-Platform Open-Source THz Image Analysis Tool - Published in JOSS (2025)

my-uniswap-7 • Science 44%

gpt4dfci • Science 57%

A private and secure generative AI tool, based on GPT-4 and deployed for non-clinical use at Dana-Farber Cancer Institute

phylo2vec • Science 67%

Phylo2Vec: a vector representation for binary trees

PyDrugLogics: A Python Package for Predicting Drug Synergies Using Boolean Models • Science 93%

PyDrugLogics: A Python Package for Predicting Drug Synergies Using Boolean Models - Published in JOSS (2025)

llama-factory • Science 67%

indicator-uncertainty • Science 67%

Scripts to explore calculation, interpretation and visualisation of uncertainty related to indicators based on biodiversity data cubes

MetaSpread: A cancer growth and metastatic spread simulation program in Python • Science 93%

MetaSpread: A cancer growth and metastatic spread simulation program in Python - Published in JOSS (2025)

mlr3extralearners: Expanding the mlr3 Ecosystem with Community-Driven Learner Integration • Science 95%

mlr3extralearners: Expanding the mlr3 Ecosystem with Community-Driven Learner Integration - Published in JOSS (2025)

deepinv • Science 54%

DeepInverse: a PyTorch library for solving imaging inverse problems using deep learning

mlgidGUI - an annotation program for 2D scattering data • Science 93%

mlgidGUI - an annotation program for 2D scattering data - Published in JOSS (2025)

STON: SofTware for petrOgraphic visualisatioN • Science 87%

STON: SofTware for petrOgraphic visualisatioN - Published in JOSS (2025)

optimeo • Science 67%

OPTIMEO is a package doubled by a web application that helps you optimize your experimental process by generating a Design of Experiment, generating new experiments using Bayesian Optimization (BO), and analyzing the results of your experiments using Machine Learning models.

PathFinder: A Matlab/Octave package for oscillatory integration • Science 93%

PathFinder: A Matlab/Octave package for oscillatory integration - Published in JOSS (2025)

NeuroCAPs — Peer-reviewed • Science 93%

NeuroCAPs: A Python Package for Performing Co-Activation Patterns Analyses on Resting-State and Task-Based fMRI Data - Published in JOSS (2025)

ActiSleep Tracker — Peer-reviewed • Science 93%

ActiSleep Tracker: a Python-based dashboard for adjusting automatic sleep predictions of actigraphy data - Published in JOSS (2025)

HINA — Peer-reviewed • Science 98%

HINA: A Learning Analytics Tool for Heterogenous Interaction Network Analysis in Python - Published in JOSS (2025)

calzone-tool • Science 44%

Evaluating the Calibration of Probabilistic Models

private-gpt • Science 44%

PANKH: An unsteady potential flow solver for hovering airfoils • Science 93%

PANKH: An unsteady potential flow solver for hovering airfoils - Published in JOSS (2025)

uav • Science 44%

无人机巡航路网智慧检测

ml4prom • Science 54%

The implementation of the paper: "Explainable Artificial Intelligence for Improved Modeling of Processes".

elasticipy • Science 49%

A python toolkit to perform common tensor operations in Continuum Mechanics

sandboxelmod • Science 44%

eitprocessing • Science 44%

Software for electrical impedance tomography data loading, visualization and processing

coqui • Science 54%

sata • Science 67%

opensim-creator • Science 49%

A UI for building OpenSim models

constants-float32-sqrt-phi • Science 44%

Square root of the golden ratio as a single-precision floating-point number.

testrepo37 • Science 54%

PyMetric: A Geometry Informed Array Mathematics Package • Science 87%

PyMetric: A Geometry Informed Array Mathematics Package - Published in JOSS (2026)

SPAC: A Python Package for Spatial Single-Cell Analysis of Multiplexed Imaging • Science 87%

SPAC: A Python Package for Spatial Single-Cell Analysis of Multiplexed Imaging - Published in JOSS (2026)

ml_rsd • Science 67%

Repository containing the work done for publication "Using Machine Learning Explainability Techniques to Examine Drivers of Ground Magnetic Field Localization" by Coughlan et al.

lapack-base-spttrf • Science 44%

Compute the `L * D * L^T` factorization of a real symmetric positive definite tridiagonal matrix `A`.

pyforce: Python Framework for data-driven model Order Reduction of multi-physiCs problEms • Science 87%

pyforce: Python Framework for data-driven model Order Reduction of multi-physiCs problEms - Published in JOSS (2026)

vkcompviz • Science 44%

Vulkan image and data processing framework capable of running a cascade of compute shaders and displaying or storing the result.

fs-resolve-parent-paths • Science 44%

Resolve paths from a set of paths by walking parent directories.

constrainthg • Science 67%

General system simulation using constraint hypergraphs

@stdlib/napi-argv-uint32array • Science 44%

Convert a Node-API value to an unsigned 32-bit integer array.

pta_data • Science 67%

An open access digital archive of antique Christian texts

itwinai • Science 44%

Advanced AI workflows for scientific digital twins

hermes-rheo • Science 49%

Python package designed to complement and extend the piblin library, offering a set of transforms tailored for analysis of rheological data

simplefoc-rs • Science 44%

An attempt at re-writing the SimpleFOC library in rust.

SatRbedo: An R package for retrieving snow and ice albedo from optical satellite imagery • Science 87%

SatRbedo: An R package for retrieving snow and ice albedo from optical satellite imagery - Published in JOSS (2026)

torch_blue: A Flexible Python Package for Bayesian Neural Networks in PyTorch • Science 87%

torch_blue: A Flexible Python Package for Bayesian Neural Networks in PyTorch - Published in JOSS (2026)

https://github.com/spectralmatch/spectralmatch • Science 49%

Relative radiometric normalization toolkit for raster mosaics and time series

localspelling • Science 44%

FAIRmaterials: Ontology Tools with Data FAIRification in Development • Science 87%

FAIRmaterials: Ontology Tools with Data FAIRification in Development - Published in JOSS (2026)

tools4rdf • Science 44%

Collection of tools for working with RDF data

$\mathcal{H}$-HIGNN Toolkit: A Software for Efficient and Scalable Simulation of Large-Scale Particulate Suspensions Using GNNs and $\mathcal{H}$-Matrices • Science 90%

$\mathcal{H}$-HIGNN Toolkit: A Software for Efficient and Scalable Simulation of Large-Scale Particulate Suspensions Using GNNs and $\mathcal{H}$-Matrices - Published in JOSS (2026)

attentionranklib • Science 44%

aiida-aimall: A Python package for automating workflows for AIMAll software • Science 87%

aiida-aimall: A Python package for automating workflows for AIMAll software - Published in JOSS (2026)

test2 • Science 44%

betaportfolio • Science 44%

Lets just see what happens

measuring-how-fast-towels-dry-using-an-infra-red-camera • Science 49%

Software to analyse video from a thermal (FLIR) camera used to determine how fast towels dry

OnlinePCA.jl: A Julia Package for Out-of-core and Sparse Principal Component Analysis • Science 87%

OnlinePCA.jl: A Julia Package for Out-of-core and Sparse Principal Component Analysis - Published in JOSS (2026)

OnlineNMF.jl: A Julia Package for Out-of-core and Sparse Non-negative Matrix Factorization • Science 87%

OnlineNMF.jl: A Julia Package for Out-of-core and Sparse Non-negative Matrix Factorization - Published in JOSS (2026)

the_cost_of_k_anonimity • Science 44%

This repository includes the code that is used for writing the thesis: the cost of k-anonymity

Reyna: A minimal overhead polytopal discontinuous Galerkin finite element library • Science 87%

Reyna: A minimal overhead polytopal discontinuous Galerkin finite element library - Published in JOSS (2026)

A Python API for OTTER • Science 87%

A Python API for OTTER - Published in JOSS (2026)

c3dr • Science 67%

Read and write C3D motion capture data in R

rydiqule • Science 75%

Rydberg Sensor Interactive Quantum Physics Module

MieSimulatorGUI: A user-friendly tool to compute and visualize light scattering by spherical dielectric particles • Science 87%

MieSimulatorGUI: A user-friendly tool to compute and visualize light scattering by spherical dielectric particles - Published in JOSS (2026)

Dyad: a binary-star dynamics and statistics library for Python • Science 87%

Dyad: a binary-star dynamics and statistics library for Python - Published in JOSS (2026)

pyfive: A pure-Python HDF5 reader • Science 92%

pyfive: A pure-Python HDF5 reader - Published in JOSS (2026)

r.earthworks • Science 67%

An add-on tool for computational terrain modeling in GRASS

BiGSTARS.jl: A Julia package for bi-global stability analysis for rotating stratified flows • Science 87%

BiGSTARS.jl: A Julia package for bi-global stability analysis for rotating stratified flows - Published in JOSS (2026)

regularizedoptimization.jl • Science 67%

Algorithms for regularized optimization

fasterai • Science 57%

FasterAI: Prune and Distill your models with FastAI and PyTorch

anvay: A Web-based Tool for Interpretive Topic Modelling in Bengali • Science 87%

anvay: A Web-based Tool for Interpretive Topic Modelling in Bengali - Published in JOSS (2026)

Htool-DDM: A C++ library for parallel solvers and compressed linear systems. • Science 92%

Htool-DDM: A C++ library for parallel solvers and compressed linear systems. - Published in JOSS (2026)

KinOpt: A Python package for chemical kinetics analysis and optimization • Science 87%

KinOpt: A Python package for chemical kinetics analysis and optimization - Published in JOSS (2026)

weaviate • Science 44%

FluxOptics.jl: A Differentiable Wave Optics Framework for Inverse Design in Julia • Science 87%

FluxOptics.jl: A Differentiable Wave Optics Framework for Inverse Design in Julia - Published in JOSS (2026)

Graphorge: An open-source forge of graph neural networks • Science 87%

Graphorge: An open-source forge of graph neural networks - Published in JOSS (2026)

tangram, an open platform for modular, real-time air traffic management research • Science 96%

tangram, an open platform for modular, real-time air traffic management research - Published in JOSS (2025)

simulist • Science 67%

An R package for simulating line lists

repapp • Science 44%

A static client-side web app to manage house sharing.

mirador-rotation-plugin • Science 44%

mirador-rotation is a Mirador 4 plugin that enables the rotation of images at any angle.

complex-cnn-deeplab-v3-with-stft-for-audio-denoising • Science 54%

Paper Name: Complex Convolution Neural Network model (Complex DeepLab v3) on STFT time-varying frequency components for audio denoising Creating a Complex Deep Lab v3 model for audio denoising using STFT complex mask Dataset from: https://datashare.is.ed.ac.uk/handle/10283/2791

infdb • Science 52%

A comprehensive database system of energy infrastructure components with integrated geospatial and time-series capabilities.

powerfactory-tools • Science 75%

A Python toolbox for the (external) control of DIgSILENT PowerFactory.

times_model • Science 23%

The Integrated MARKAL-EFOM System (TIMES) - a bottom-up optimization model for energy-environment systems

orthanc-ohif • Science 57%

This is a read-only mirror of https://hg.orthanc-server.com/orthanc-ohif/

baysc: An R package for Bayesian survey clustering • Science 87%

baysc: An R package for Bayesian survey clustering - Published in JOSS (2026)

myhoneybee • Science 44%

Projeto de desenvolvimento de um ninho (caixa modelo AF) para abelhas nativas (sem ferrão) com variáveis ambientais monitoradas por IOT.

identificador_de_chamas • Science 54%

biodiscvr: Biomarker Discovery Using Composite Value Ratios • Science 87%

biodiscvr: Biomarker Discovery Using Composite Value Ratios - Published in JOSS (2026)

Napari-3D-Counter: A manual cell counter for napari • Science 87%

Napari-3D-Counter: A manual cell counter for napari - Published in JOSS (2026)

lesson-development-training • Science 67%

Collaborative Lesson Development Training curriculum

yolov5 • Science 44%

lizhehan work yolov5

PySGN: A Python package for constructing synthetic geospatial networks • Science 87%

PySGN: A Python package for constructing synthetic geospatial networks - Published in JOSS (2026)

oir • Science 54%

Internal package to standardize preliminary data analysis, including common initial exploratory feedback

recommender_system_backend • Science 49%

evoxels: A differentiable physics framework for voxel-based microstructure simulations • Science 87%

evoxels: A differentiable physics framework for voxel-based microstructure simulations - Published in JOSS (2026)

htruc • Science 44%

HTR-United Catalog tooling (pronunced EuchTruc)

OptiGob: A decision support tool for Agriculture, Forestry and Other Land Use transitions • Science 87%

OptiGob: A decision support tool for Agriculture, Forestry and Other Land Use transitions - Published in JOSS (2026)

damagedlogginganalyzer • Science 44%

A project about an analyzation of a statistic of damaged logging (wood) in Germany using Python.

Tissue Data Explorer: a website template for presenting tissue sample research findings • Science 95%

Tissue Data Explorer: a website template for presenting tissue sample research findings - Published in JOSS (2026)