GitHub

https://github.com

Updated 6 months ago

graci • Science 44%

General Reference Configuration Interaction package

Updated 6 months ago

swatplus • Science 52%

Soil and Water Assessment Tool +

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iea_data_guidance_doc_template • Science 44%

Use this repo to engage the broader IEA community to share recommended approaches/best practices.

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baldeagle • Science 44%

3x Faster Inference; Unofficial implementation of EAGLE Speculative Decoding

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timsimaging • Science 54%

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realify • Science 44%

Turn quick face sketches into photorealistic 2D portraits and interactive 3D models

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carbon-budget • Science 54%

Calculate gross GHG emissions, gross carbon removals (sequestration), and net flux from forests globally

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ndarray-every • Science 44%

Test whether every element along one or more ndarray dimensions is truthy.

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textured_gaussians • Science 54%

*Unofficial* code release for CVPR 2025 paper "Textured Gaussians for Enhanced 3D Scene Appearance Modeling".

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wikiproject-mainpage-analysis • Science 44%

Analytics of which WikiProjects have related articles on the main page

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ns9188k • Science 44%

AIRS/LBL Radiances 2003-2021

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uvicorn • Science 44%

An ASGI web server, for Python. 🦄

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utility • Science 44%

Repository for Utility

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tour-championship-strokes-gained-analysis • Science 44%

Developed an expected strokes model to identify player performance for the 2011 PGA TOUR Championship

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ndarray-base-count-truthy • Science 44%

Count the number of truthy elements in an ndarray.

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orthanc-stone • Science 57%

This is a read-only mirror of https://hg.orthanc-server.com/orthanc-stone/

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mtmed3d • Science 44%

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oralhistoryasdata.github.io • Science 44%

Promotional page for the Oral History as Data (OHD) project

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mmkariv • Science 67%

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bda • Science 44%

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lorepy • Science 54%

A library to create lore plots (logistic regression of the prevalence of a categorical variable in function of a continuous feature)

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biger2orm • Science 44%

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redcap_zebra_label_printer • Science 75%

REDCap Zebra Label Printer external module extends REDCap to print labels to Zebra printers using data from a REDCap record

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transformers • Science 67%

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reid-tta • Science 67%

The official implementation for IJCNN 2024 paper "Test-time Similarity Modification for Person Re-identification toward Temporal Distribution Shift."

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https://github.com/cispa/security-header-parsing • Science 67%

Code for our 2025 ACM CCS Paper "Head(er)s Up! Detecting Security Header Inconsistencies in Browsers"

Updated 6 months ago

https://github.com/cispa/osiris • Science 49%

Proof-of-concept implementation for the paper "Osiris: Automated Discovery of Microarchitectural Side Channels" (USENIX Security'21)

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numerical_cv_sim_1d_diffusion • Science 44%

matlab code developed to simulate cyclic voltammetry for thin-film ion insertion electrodes. Code assumes 1D geometry and no resistance.

Updated 6 months ago

https://github.com/crowdstrike/foundry-sample-servicenow-idp • Science 44%

ServiceNow CMDB Ingest For Identity Protection sample Foundry app

Updated 5 months ago

https://github.com/dhschall/champsim • Science 13%

ChampSim repository

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pycrispr • Science 44%

Pip package for CRISPR-Cas9 screen analysis

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lang-tlh • Science 44%

Finite state and Constraint Grammar based analysers and proofing tools, and language resources for the Klingon language

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timeax • Science 44%

Multiple trajectory alignment of time-series data

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aerial-power • Science 44%

Aerial Power Infrastructure Detection Dataset

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https://github.com/dhschall/gapbs • Science 10%

GAP Benchmark Suite

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plf-es-2023-1-ti2-0924100-skanboo • Science 44%

plf-es-2023-1-ti2-0924100-skanboo created by GitHub Classroom

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sosaa-gui • Science 67%

GUI for configuring the SOSAA model

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segway • Science 44%

Application for semi-automated genomic annotation.

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harvest_x_climate_landis • Science 44%

LANDIS-II experiment

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hydesign • Science 49%

Updated 4 months ago

https://github.com/giorgiaauroraadorni/gansformer • Science 10%

Generative Adversarial Transformers

Updated 5 months ago

https://github.com/dhschall/binary-neural-networks • Science 10%

Exploring "Binary Neural Networks" (https://arxiv.org/abs/1602.02830) in Theano. A set of experiments that use binarised weights and/or activations to reduce computational load of convolutional neural networks.

Updated 5 months ago

https://github.com/dhslab/dhslab-docker-images • Science 26%

Docker images for the Spencer lab

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https://github.com/dhslab/covfast • Science 26%

Small c program to calculate coverage from a bam/cram over bed intervals

Updated 5 months ago

https://github.com/dhslab/epibench • Science 26%

EpiBench is a software tool designed for predicting DNA methylation levels using genomic sequence data and histone modification marks. It employs a multi-branch CNN architecture tailored for integrating these data types to achieve high prediction accuracy.

Updated 5 months ago

https://github.com/dhslab/peakachu-cohort • Science 26%

Wraps Peakachu’s train and score_genome functions in a parallelized CLI subcommand enabling scalable analysis across cohorts without manual per-sample commands.

Updated 6 months ago

pyfas • Science 67%

wrapper around Bo Guo's PFAS Leach screening tool

Updated 5 months ago

https://github.com/dhslab/methfast • Science 26%

Simple c program for manipulating bed-like methylation files

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workshop • Science 44%

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datacovhcq • Science 49%

Hydroxychoroquine debates on Twitter: data collected.

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catalyst • Science 67%

Updated 5 months ago

https://github.com/dhslab/cutandrun • Science 23%

Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream analysis.

Updated 6 months ago

workshop-git • Science 44%

Repository for the git and GitHub workshop.

Updated 5 months ago

https://github.com/dhslab/cle-soma • Science 13%

CLE SOMA workflow

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https://github.com/dhslab/dhsrmethtools • Science 13%

R functions for methylation analysis

Updated 6 months ago

pbe-si-2025-1-p5-tias-7375100-2025-1-p5-tias-template-tias • Science 44%

pbe-si-2025-1-p5-tias-7375100-2025-1-p5-tias-Template-TIAS created by GitHub Classroom

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web-dev • Science 44%

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reaxana • Science 57%

fast-CPXread: A code for analyzing reactive trajectories

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stats-strided-dmeanwd • Science 57%

Calculate the arithmetic mean of a double-precision floating-point strided array using Welford's algorithm.

Updated 6 months ago

pc-para-todas • Science 54%

Demostración de github pages

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https://github.com/dhslab/nf-core-hicmap • Science 13%

3D genome contacts calling from HiC data

Updated 6 months ago

childhood-blackwater-fever-scoping-review • Science 67%

A comprehensive scoping review of blackwater fever among children in sub-Saharan Africa, including data extraction, PRISMA-ScR workflows, analysis scripts, and visualizations for transparent, reproducible research

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covpipe2 • Science 54%

SARS-CoV-2 genome reconstruction for Illumina data in Nextflow

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kg-cybersec • Science 44%

Updated 6 months ago

old-instruments • Science 44%

A collection of antique, semi-antique, and vintage instruments, as well as modern reissuances of classic models. These instruments were all acquired in a used condition, and some have been modified by previous or current owners.

Updated 6 months ago

bckd • Science 54%

Official Implementation of Bridging Cross-task Protocol Inconsistency for Distillation in Dense Object Detection

Updated 6 months ago

topopt • Science 44%

Simple easy-to-use Topology Optimization based scripts for a variety of applications

Updated 6 months ago

nf-core-clrpolish • Science 57%

Nf-core pipeline to polish long-read assemblies originated from pacbio clr reads (mainly from pacbio sequel platforms)

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2025-04-28-tudelft-scw • Science 44%

Software Carpentry Workshop at TU Delft from April 28 to May 1, 2025

Updated 6 months ago

jaxtronomy • Science 44%

JAX port of lenstronomy, for parallelized, GPU accelerated, and differentiable gravitational lensing and image simulations.

Updated 5 months ago

https://github.com/dhsoncoder/sothuchi_63va • Science 13%

An Android application to manage personal expenses

Updated 6 months ago

modet • Science 44%

Multi-scale oriented detection with shared convolution head

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threepp-j6 • Science 44%

Updated 6 months ago

jsotemplate.jl • Science 44%

Template for JSO packages