GitHub
deepfri-explainability
Explainability methods employed for the DeepFRI protein function algorithm
accountability-docker-solution
This repository includes a Docker-based accountability solution based on Sysdig, Librdkafka producer, Kafka and MongoDB. The proposed solution aims to identify the causes that have triggered a set of specific events, thanks to the use of the syscalls run by the monitored system. Features such as being completely decoupled from the monitored system, real-time analysis and optimized querying make this solution an optimal choice when it comes to understanding the root causes of a system's behaviour. Different assessment scenarios have been developed to define the best strategy to reduce the impact of the audit process and logging tasks.
womenshealthandwellbeing_public
Public code for training the NLU for the Women's Health and Wellbeing project
emba
emba: R package for analysis and visualization of biomarkers in boolean model ensembles - Published in JOSS (2020)
hybriduavplanning
Set of Julia functions and structures for hybrid fuel UAV path planning and power management.
rnaseq-quantification-pipeline
Developmental private RNASeq pipeline for bacterial quantification.
plmg-cc-ti2-2024-1-g20-planejaprato
plmg-cc-ti2-2024-1-g20-planejaprato created by GitHub Classroom
yolov5-parts
Training of VOC2007(or T-LESS) dataset using YOLOv5 (including improved version)
u_mo_pfaeh_moose
MOOSE-based codes and inputs to evaluate effective elastic constants of U10Mo with various porosity distributions
psg-ads-2024-1-p2-tiapn-7358-1-01-afiados-estilosos
psg-ads-2024-1-p2-tiapn-7358-1-01-equipe-4 created by GitHub Classroom
check_my_code
Because we all need pointers when it comes to make our code better.
ti-1-pmg-cc-m-20231-tiaw-questoes-sobre-educacao-1
ti-1-pmg-cc-m-20231-tiaw-questoes-sobre-educacao-1 created by GitHub Classroom
antibodyfvtm50predictor
MRes project - Predicting the melting temperature of antibodies using machine learning techniques.
fnirs_decodingspatialattention
Codes for Decoding Attended Spatial Location during Complex Scene Analysis with fNIRS.
signalslite
A small library to efficiently store and process global equity data, especially for Numerai's Signals tournament (WIP)
CPgeneProfiler
CPgeneProfiler: A lightweight R package to profile the Carbapenamase genes from genome assemblies - Published in JOSS (2020)
chips
Open source code to unveil the Complete History of Interaction-Powered Supernovae
peptidesim
Automated peptide simulation tool with gromacs, gromacswrapper, plumed
benford_russian_income_surveys
This is the code and data to replicate the analysis in Skougarevskiy (2023)'s "Russian Household Income Surveys: Ensuring Data Quality" paper.
tunnrl_tbm_maintenance
Working repository for the code of the TunnRL TBM project
cactool
An easy way to collaboratively code social media posts for manual content and discourse analysis
codesparks-framework
The CodeSparks framework aims to facilitate the integration of software analysis tools into the IDE such that their results are shown as glyph-based visualizations in the source code.
towards-personalized-neural-networks-for-epileptic-seizure-prediction
Supporting materials - paper - "Towards Personalized Neural Networks for Epileptic Seizure Prediction"
rbs_application_level_implementation
Implementation of Replication-Based Scheduling (RBS) on the application level in a form of a library written in c.
mri_k-space-derived_details_edges
k-space based details/edges detection in MRI images with optional k-space based denoising and detail control (on the example of Agilent FID data). (Python 3)
cfkg
Data cleaning steps and mappings used to transform data from different sources to RDF
groundcalc
MATLAB toolbox designed for analysis of grounding grids (grounding impedance, GPR, leakage currents, touch voltage, step voltage distributions. and safe limits).
pmv-ads-2024-1-e5-proj-empext-t2-fermaloc
pmv-ads-2024-1-e5-proj-fermaloc-t2 created by GitHub Classroom
high-coverage-wgs-deepvariant-genotyping-pipeline
High Coverage WGS DeepVariant Genotyping Pipeline from UCSD Palmer Lab
bids
Template for new EEG studies in NCIL, using BIDS-compliant structure and scripts to import data.
biobb_wf_structure_checking
This tutorial aims to illustrate the process of checking a molecular structure before using it as an input for a Molecular Dynamics simulation using the BioExcel Building Blocks library (biobb).
hstrat-recomb-concept
Exploratory work to apply hereditary stratigraphy methodology to sexual populations.
loris
Loris: Database and Analysis application for a Drosophila Lab (or any lab)
visual-grain-analyzer
Visual Grain Analyzer (VGA) is a user-friendly ImageJ macro, which has utilized ImageJ/or Fiji facilities to provide a simple tool for grain analysis, seed technology, and phenomics studies.
paganini
A generative adversarial network trained to compose virtuosic classical music with an SVM discriminator system (C-RNN-GAN).
pmv-si-2024-1-pe3-t2-banco-de-doadores-de-sangue
pmv-si-2024-1-pe3-t2-banco-de-doadores-de-sangue created by GitHub Classroom
etale-algebra-family
Package in Mama for computing isomorphism classes of one-parameter families of local étale algebras
pmv-ads-2023-2-e1-proj-web-t5-finanfy
pmv-ads-2023-2-e1-proj-web-t5-finanfy created by GitHub Classroom
o2solubilitywater
Calculate oxygen solubility in water at any temperature between 0°C - 50°C based on published empirical model (Hitchman, Measurement of Dissolved Oxygen, 1978), and tabulated vapour pressures of water.
pmv-ads-2023-1-e3-proj-mov-t5-projeto_pexinxa
pmv-ads-2023-1-e3-proj-mov-t5-projeto_pexinxa created by GitHub Classroom