GitHub
cpg0017-rohban-pathways-data
Image based profiles regenerated for cpg0017-rohban-pathways (TA-ORF) using 2023 workflow. As found in the cellpainting-gallery.
npl
The NanoParticleLibrary (NPL) is a Python library for simulating and optimizing nanoparticle structures, built on ASE.
langchain-chatbot
AI Chatbot for analyzing/extracting information from data in conversational format.
information_disclosure_searchtools
A Python tool developed by Hafid Fajar, co-founder of Garuda Cyberthreat. It's specifically designed for full-power information disclosure vulnerability scanning, quickly and efficiently uncovering exposed sensitive data.
pace_oci_conversion
R scripts for converting PACE LandVI data from NetCDF to GeoTIF
eVAS
eVAS: A user-friendly electronic Visual Analogue Scale - Published in JOSS (2025)
skder
skDER & CiDDER: efficient & high-resolution dereplication of microbial genomes.
carbon-aware-nextflow-on-k8s
Run carbon-aware Nextflow pipelines on Kubernetes using real-time ElectricityMap data to reduce emissions from compute-heavy tasks.
@hugoalh/range-iterator
An ECMAScript (JavaScript & TypeScript) module to iterate between range.
stats-strided-wasm-dmeanors
Calculate the arithmetic mean of a double-precision floating-point strided array using ordinary recursive summation.
transform-emr
This model is a decoder transformer based model aiming to model events predictions from EMR records as a sequential text generation problem. This project is a part of my thesis research.
dynamic-consent-management
Dynamic Consent Management of Speakers in Voice Assistant Systems
ucd-agg-website
Laboratory website for the University College Dublin Animal Genomics Group (UCD-AGG)
constructive-konig
Coq artifact for "Constructive substitutes for König's lemma"
hicberg
Statistical profiling based program for contact (Hi-C) and pair ended genomic data reconstruction
fairroot
C++ simulation, reconstruction and analysis framework for particle physics experiments
https://github.com/jageo/mace-mp-03b-phonon-benchmark
Phonon calculations and evaluation for the MACE MP-0b3 model
nagios-plugin-perl-templates
A set of templates for Nagios check scripts written in Perl.
lightworks
Lightworks is an open-source Python SDK for photonic quantum computing.
StochasticSeriesExpansion
General purpose stochastic series expansion quantum Monte Carlo code.
emolysis
[ACII Demo] Emolysis: A Multimodal Open-Source Group Emotion Analysis and Visualization Toolkit
corticalfolding_ad_aging
Description of the procedures and analysis present in de Moraes et al., in submission. This manuscript was included as Manuscript 1, Independent morphological variables correlate to aging, Mild Cognitive Impairment, and Alzheimer's Disease, at the Doctorate Thesis presented to the Programa de Pós-Graduação em Ciência Médicas at the Instituto D’Or de Pesquisa e Ensino as a partial requirement to obtain the Doctorate Degree. The part of the data used here cannot be shared due to restrictions of the Ethic Comittee. Data can be shared upon reasonable request to the corresponding author. To fullfil these limitation, we will generate random data to simulate the results. The data used at the Supplementary Information are processed data from AHEAD and AOMIC (PIOP1 and PIOP2) (to be uploaded). Get in touch with us (fernandahmoraes@gmail.com) in case any help is needed, our aim is to improve the code as needed! Please cite this work if used: DOI insert DOI code
quan_ultralytics
Quaternion Approximate Networks Ultralytics Repository. Implementation of QUAN with YOLO.
sin
Pulls images from the trusted namespace in dockerhub, runs a security scan, and builds it using singularity with optimal settings for mutable .sif containers along with a command tree allowing for standardized shell and execution. For remote execution for NAT access, memorizes the default credentials to use simplifying access from edge devices
https://github.com/jageo/gaussian_wave_packet
Repo to simulate time-evolution of a Gaussian wave packet
llms_from_scratch
A code along Sebastian Raschka book how to build an llm from scratch
deepfri-explainability
Explainability methods employed for the DeepFRI protein function algorithm
accountability-docker-solution
This repository includes a Docker-based accountability solution based on Sysdig, Librdkafka producer, Kafka and MongoDB. The proposed solution aims to identify the causes that have triggered a set of specific events, thanks to the use of the syscalls run by the monitored system. Features such as being completely decoupled from the monitored system, real-time analysis and optimized querying make this solution an optimal choice when it comes to understanding the root causes of a system's behaviour. Different assessment scenarios have been developed to define the best strategy to reduce the impact of the audit process and logging tasks.
womenshealthandwellbeing_public
Public code for training the NLU for the Women's Health and Wellbeing project
hybriduavplanning
Set of Julia functions and structures for hybrid fuel UAV path planning and power management.
rnaseq-quantification-pipeline
Developmental private RNASeq pipeline for bacterial quantification.
plmg-cc-ti2-2024-1-g20-planejaprato
plmg-cc-ti2-2024-1-g20-planejaprato created by GitHub Classroom
yolov5-parts
Training of VOC2007(or T-LESS) dataset using YOLOv5 (including improved version)
u_mo_pfaeh_moose
MOOSE-based codes and inputs to evaluate effective elastic constants of U10Mo with various porosity distributions
psg-ads-2024-1-p2-tiapn-7358-1-01-afiados-estilosos
psg-ads-2024-1-p2-tiapn-7358-1-01-equipe-4 created by GitHub Classroom
check_my_code
Because we all need pointers when it comes to make our code better.
ti-1-pmg-cc-m-20231-tiaw-questoes-sobre-educacao-1
ti-1-pmg-cc-m-20231-tiaw-questoes-sobre-educacao-1 created by GitHub Classroom
antibodyfvtm50predictor
MRes project - Predicting the melting temperature of antibodies using machine learning techniques.
fnirs_decodingspatialattention
Codes for Decoding Attended Spatial Location during Complex Scene Analysis with fNIRS.
signalslite
A small library to efficiently store and process global equity data, especially for Numerai's Signals tournament (WIP)
