GitHub
ocean-nitrogen-isotopes-box-models
Prognostic ocean model of nitrate isotopes (Fripiat et al., 2023, GBC, www...)
multi-variate-parallel-transformer
Repository for paper "A foundation model with multi-variate parallel attention to generate neuronal activity"
powerfit-em
Rigid body fitting of atomic strucures in cryo-electron microscopy density maps
scnanoseq
Single-cell/nuclei pipeline for data derived from Oxford Nanopore and 10X Genomics
https://github.com/dcbr/pyvista
3D plotting and mesh analysis through a streamlined interface for the Visualization Toolkit (VTK)
3dcap-md-gen
Scripts for exporting scanning metadata as described in the publication "Metadata Schema and Ontology for Archaeological Object Documentation including 3D Imaging (AOD-3DI)"
ensemblecontrolsimulation
Supplementary code for the manuscript: Convergence rates for ensemble-based solutions to optimal control of uncertain dynamical systems
https://github.com/dcelisgarza/portfoliooptimiser.jl
Portfolio optimisation library.
high-throughput-lmto
This package automates the TB-LMTO-ASA program for high-throughput calculations
https://github.com/dcelisgarza/riskfolio-lib
Portfolio Optimization and Quantitative Strategic Asset Allocation in Python
https://github.com/dcelisgarza/makie.jl
Interactive data visualizations and plotting in Julia
elixir-trp-fair-training-handbook
Train-the-trainer handbook for making training materials FAIR
multiplesequencealign
A pipeline to run and systematically evaluate Multiple Sequence Alignment (MSA) methods.
mechanism-configuration
A description of the CAMP chemistry mechanism configuration, with examples
numbacs
Python package which takes advantage of Numba to efficiently implement a variety of coherent structure methods and analyze time-dependent dynamical systems.
AnalyticalStructureFactors
AnalyticalStructureFactors.jl: A Julia package for computing static structure factors using analytical solutions for various physical models. Ideal for rapid and precise calculations in condensed matter physics, chemical physics, and materials science.
avalan
The multi-backend, multi-modal framework for AI agent development, orchestration, and deployment
pairwise-insights-dynamic-ggpairs-visualizer
Pairwise Insights: Dynamic ggpairs Visualizer
utils
TODO: add most if not all the usual libs that I use in one repo, so I can easily use it
stats-strided-dvarianceyc
Calculate the variance of a double-precision floating-point strided array using a one-pass algorithm proposed by Youngs and Cramer.
mierda
The Multidimensional Insufficient Effort Responding Detection Approach (mIERda) for Psychometric and Survey Data
snakemake-learning
GitHub Repository for the snakemake learn session at the @MannLabs Group Retreat 2025
psy-3035-python-course
Data visualization using Python. Master's course (PSY-3035) at UiT.
cymr
Fast and flexible implementation of the context maintenance and retrieval model (CMR)
guadalshiftr
Exploring tipping points, catastrophic bifurcations and alternative stable states in the Guadalquivir marshes
