GitHub
aaic-neuroimaging-workshop
Carpentries pages for "Getting Started With Neuroimaging Analysis" Immersive workshop (2025 onward)
pmv-ads-2023-1-e3-proj-mov-t1-projeto-firstep
pmv-ads-2023-1-e3-proj-mov-t1-projeto-firstep created by GitHub Classroom
meta_analysis_brohee
Meta-analysis of diet effects on the Periplaneta americana gut microbiome. Includes raw data, R scripts for effect-size calculation (Hedges’ g, log-RR), mixed-effects models, and reproducible forest, funnel & sensitivity plots.
pyg4ometry
Python code for rapid creation and conversion of radiation transport Monte Carlo (Geant4 and Fluka) geometries
distclassipy
A python package for a distance-based classifier which can use several different distance metrics.
enance-amamento
A template library for headless rendering of Signed Distance Fields based on OpenMP.
drgpum
A memory profiler for NVIDIA GPUs to explore memory inefficiencies in GPU-accelerated applications.
gender-parity-eanrm2025
A data-driven project analyzing gender parity in Venezuela’s 2025 National Assembly, regional, and municipal elections. Includes code, datasets, and tools for transparency and research.
cda-systems-ref-arch
An abstract concept drift adaptation system reference architecture fit for employing it to design specialized system architectures.
imswitch
ImSwitch is a software solution in Python that aims at generalizing microscope control by providing a solution for flexible control of multiple microscope modalities.
flfm-ij-plugin
A Java ImageJ 1.x Plugin Wrapper for the FLFM Project (https://github.com/ssec-jhu/flfm)
lncinference
This is a repository for collaboration to implement the transcript reconstruction pipeline for long non-coding RNAs using long reads from Oxford Nanopore..
needalight
Repo for calculating properties of squeezed light from waveguided sources.
birdeep_birdsongdetector_neuralnetworks
Repository for the neural networks and models created for the BIRDeep project
foundry-sample-detection-translation
Detection translation and context sample Foundry app
megpy
A magnetic equilibrium geometry Python package for tokamaks and stellarators
h2seq
Nextflow pipeline for the analysis of sequencing data from HCV, HIV (and others?)
opr-paas
An operator providing a multi tenancy solution which allows DevOps teams to request a context for their project, which we like to call a 'Project as a service', e.a. Paas.
megaisurv-namaste
Nanopore Metagenomic Antibiotic Resistance and Taxonomy Screening
hypergraphx
HGX is a multi-purpose, open-source Python library for higher-order network analysis
fhir-specifications-xml
FHIR specifications XML files thanks to the HL7 FHIR official website downloads.
absp
Analysis of Bisulfite Sequencing PCR experiments, with R, to compute CpG methylation levels and identify methylation differences on specific DNA regions of interest.
geocat-applications
GeoCAT Applications is a community resource inspired by the NCL Applications page.
openff-nagl-models
This repository contains NAGL models released by the Open Force Field Initiative. They are intended to be used by OpenFF NAGL.
openflash
Semi-analytical hydrodynamics modeling including matched eigenfunction expansion method
ena-spike-ntd-repdel-analysis
A Snakemake workflow with associated scripts used for detecting spike NTD repaired deletions in SARS-CoV-2 Omicron BA.1 lineage reads. Manuscript under review.
cooksmart-recipe-recommender-application
CookSmart is a feature-rich recipe recommender app leveraging ReactJS, NodeJS, and Firebase for user authentication, database management. Integrated with Gemini API for real-time recipe searches powered by NLP, enabling personalized recipe recommendations.
kafka-dicom-fhir-pipeline
A simple project that use kafka to connect dicom and fhir.
sparql-profiler
✨ A package to profile SPARQL endpoints to extract the nodes and relations represented in the knowledge graph
luce
🧊 LUCE: A Blockchain-based data sharing platform for monitoring data license accountability and compliance.
eeg-imagined-speech-recognition
Imagined speech recognition using EEG signals. KaraOne database, FEIS database.
targets-uahpc
A template repository with instructions on how to run a targets workflow using the UAz cluster
bigdata-corp-api
Python API to facilitate interaction with BigDataCorp end-points
stats-base-dists-planck-logcdf
Evaluate the logarithm of cumulative distribution function (CDF) for a Planck (discrete exponential) distribution.
measure-traces
Repo for measuring (Internet) traces. Evaluate micro-batching in data stream processing and the impact of a batch loss on Count-Min Sketch estimation error.
cardiomechanics
Finite element framework for cardiac electromechanics problems
openvqe
Quantum computing algorithms and applications package. Please check our article https://doi.org/10.1002/wcms.1664. Do you want to contribute? Fork the project, create a pull request directed to the alpha branch of the repo.
gptopus
🐙GPTopus is a decoder-only transformer that generates new text based on input text