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Recent Releases of simulatedmicroscopy

simulatedmicroscopy - v1.6.2

Commits

  • 78a3e83: Added DOI badge to README.md (Roy Hoitink)
  • 8502d79: Updated CITATION.cff file (Roy Hoitink) #17
  • a863b84: Added support for cupy convolution if installed (Roy Hoitink) #17
  • 5cdbc23: Automatically find root element for HuygensImage, fixes #13 (Roy Hoitink) #16
  • 5b6d875: Improve loading of h5file, automatically detect format (Roy Hoitink) #16

- Python
Published by github-actions[bot] almost 2 years ago

simulatedmicroscopy - v1.6.1

Commits

  • 78310f8: Fix bug in noise generation (Roy Hoitink) #15
  • 349b120: Updated CITATION.cff version (Roy Hoitink) #15
  • 9b706cf: Fixed getpixelsize default argument (Roy Hoitink) #15

- Python
Published by github-actions[bot] about 2 years ago

simulatedmicroscopy - v1.6.0

Commits

  • ad56927: Implemented new way of noise simulation (Roy Hoitink) #14
  • ab036a4: Update docs on noise and prevent negative values in Poisson distribution (Roy Hoitink) #14
  • 5e7fa38: Add testing for Python 3.12 (Roy Hoitink) #14
  • cf58cc0: Switched to pyproject.toml based setup (Roy Hoitink) #14
  • fb7ddc9: Updated github actions versions (Roy Hoitink) #14
  • 761dbe2: Removed _version.py from git (Roy Hoitink) #14
  • d1aeec1: Merge branch 'main' of https://github.com/rhoitink/simulatedmicroscopy into develop (Roy Hoitink) #14

- Python
Published by github-actions[bot] about 2 years ago

simulatedmicroscopy - v1.5.0

Commits

  • e36a191: Updated documentation to properly format docstrings (Roy Hoitink) #12
  • 35d7182: Remove non-existing page from mkdocs.yml (Roy Hoitink) #12
  • d7902e9: Added contributing guide (Roy Hoitink)
  • f7dbb9b: Update issue templates (Roy Hoitink)
  • c3a2d8c: Allow passing list of edgepixelmargin to createparticleimage (Roy Hoitink) #12
  • 3091757: Bump version: 1.4.0 → 1.5.0 (Roy Hoitink)

- Python
Published by github-actions[bot] over 2 years ago

simulatedmicroscopy - v1.4.0

Commits

  • a143aab: Added function to extract subpart of image containing a single particle (Roy Hoitink)
  • 114b033: Bump version: 1.3.0 → 1.4.0 (Roy Hoitink)

- Python
Published by github-actions[bot] over 2 years ago

simulatedmicroscopy - v1.3.0

Commits

  • 3c6367d: Improved speed of createparticleimage method (Roy Hoitink) #10
  • fa691f6: Added spherocylinder particle type (Roy Hoitink) #10
  • b983660: Typos in spherocylinder test names (Roy Hoitink) #10
  • 1c703cd: Added cube particle type (Roy Hoitink) #10
  • c784391: Bump version: 1.2.0 → 1.3.0 (Roy Hoitink)

- Python
Published by github-actions[bot] over 2 years ago

simulatedmicroscopy - v1.2.0

Commits

  • bf410d7: Added option to add extra empty pixels around the createparticleimage (Roy Hoitink) #9
  • 3790a35: Bump version: 1.1.0 → 1.2.0 (Roy Hoitink)

- Python
Published by github-actions[bot] over 2 years ago

simulatedmicroscopy - v1.1.0

Commits

  • 1b638c8: Changed downsampling method, closes #7 (Roy Hoitink)
  • f510075: Speed up sphere and shell particle generation by caching response (Roy Hoitink)
  • 8f820b7: Merge branch 'develop' into main (Roy Hoitink)
  • 792d3b2: Bump version: 1.0.0 → 1.1.0 (Roy Hoitink)

- Python
Published by github-actions[bot] almost 3 years ago

simulatedmicroscopy - v1.0.0

Commits

  • b16358b: Added syntax highlighting to docs (Roy Hoitink)
  • b276748: Added functionality to add custom metadata to images (Roy Hoitink)
  • 71693fd: Added attributes for when the image is convolved, downsampled or noisified (Roy Hoitink)
  • HuygensImage did not raise error when file does not exist (Roy Hoitink)
  • fa89ded: Added test for array overlap function (Roy Hoitink)
  • 2cde0ae: Fixed pointparticle dimensionality (Roy Hoitink)
  • 032a72b: Bump version: 0.4.3 → 1.0.0 (Roy Hoitink)

- Python
Published by github-actions[bot] almost 3 years ago

simulatedmicroscopy - v0.4.3

Commits

  • 312e0b8: Updated documentation (Roy Hoitink)
  • b7adbbd: Bump version: 0.4.2 → 0.4.3 (Roy Hoitink)

- Python
Published by github-actions[bot] almost 3 years ago

simulatedmicroscopy - v0.4.2

Commits

  • f51fe9c: Only deploy docs for new tagged version (Roy Hoitink)
  • 194be83: Fixed bug where downsampling changed the wrong axis (Roy Hoitink)
  • c35b413: Bump version: 0.4.1 → 0.4.2 (Roy Hoitink)

- Python
Published by github-actions[bot] almost 3 years ago

simulatedmicroscopy - v0.4.1

Commits

  • 381f46d: Added automatic release workflow (Roy Hoitink)
  • b49d66c: Added pip cache to package workflow (Roy Hoitink)
  • 19ef83e: Removed caching as it cause an error (Roy Hoitink)
  • 5fe4de8: Fix bug with comparing floats of pixel sizes (Roy Hoitink)
  • 22eb9c2: Bump version: 0.4.0 → 0.4.1 (Roy Hoitink)

- Python
Published by github-actions[bot] almost 3 years ago

simulatedmicroscopy - v0.4.0

What's Changed

  • Added bump2version config by @rhoitink in https://github.com/rhoitink/simulatedmicroscopy/pull/5

Full Changelog: https://github.com/rhoitink/simulatedmicroscopy/compare/v0.3.0...v0.4.0

- Python
Published by rhoitink almost 3 years ago

simulatedmicroscopy - v0.3.0

What's Changed

  • Added particle class to create synthetic image of any kind of particle geometry at set coordinates

Full Changelog: https://github.com/rhoitink/simulatedmicroscopy/compare/v0.2.0...v0.3.0

- Python
Published by rhoitink almost 3 years ago

simulatedmicroscopy - v0.2.0

What's Changed

  • Particle coordinates are now available as attribute of the Image class, when generated via create_point_image

Full Changelog: https://github.com/rhoitink/simulatedmicroscopy/compare/v0.1.0...v0.2.0

- Python
Published by rhoitink about 3 years ago

simulatedmicroscopy - v0.1.0

Initial version

- Python
Published by rhoitink about 3 years ago