Recent Releases of bigtools
bigtools - pybigtools@v0.2.5
Full Changelog: https://github.com/jackh726/bigtools/compare/pybigtools@v0.2.4...pybigtools@v0.2.5
- Rust
Published by jackh726 11 months ago
bigtools - pybigtools@v0.2.4
What's Changed
- Support building with maturin 1.8.0. by @ghuls in https://github.com/jackh726/bigtools/pull/68
- Bump pybigtools dependencies, namely pyo3 to 0.22 and numpy to 0.22
- Fix wrong assert for oob bins
- Add autosql option to BigBedWrite::write
- Fix missing after assigning values, using NAN as a sentinel for missing.
Full Changelog: https://github.com/jackh726/bigtools/compare/pybigtools@v0.2.3...pybigtools@v0.2.4
- Rust
Published by jackh726 about 1 year ago
bigtools - v0.5.5
What's Changed
- Fix specifying start coordinate of bigbedtobed and bigwigtobedgraph. by @ghuls in https://github.com/jackh726/bigtools/pull/69
- Handle empty bedGraph input file. by @ghuls in https://github.com/jackh726/bigtools/pull/70
- Automatically recognise
/dev/stdinas stdin in bedgraphtobigwig and… by @ghuls in https://github.com/jackh726/bigtools/pull/72 - Fix merge for small and zero values
- Only use zooms <= u32::MAX
Full Changelog: https://github.com/jackh726/bigtools/compare/v0.5.4...v0.5.5
- Rust
Published by jackh726 about 1 year ago
bigtools - pybigtools@v0.2.3
What's Changed
- Make certain fields public within BigWigMerge structs by @donaldcampbelljr in https://github.com/jackh726/bigtools/pull/60
- Help maturin recognize mixed rust-python project by @nvictus in https://github.com/jackh726/bigtools/pull/65
New Contributors
- @donaldcampbelljr made their first contribution in https://github.com/jackh726/bigtools/pull/60
Full Changelog: https://github.com/jackh726/bigtools/compare/pybigtools@v0.2.2...pybigtools@v0.2.3
- Rust
Published by jackh726 over 1 year ago
bigtools - v0.5.4
What's Changed
- Make certain fields public within BigWigMerge structs by @donaldcampbelljr in https://github.com/jackh726/bigtools/pull/60
- Help maturin recognize mixed rust-python project by @nvictus in https://github.com/jackh726/bigtools/pull/65
New Contributors
- @donaldcampbelljr made their first contribution in https://github.com/jackh726/bigtools/pull/60
Full Changelog: https://github.com/jackh726/bigtools/compare/v0.5.3...v0.5.4
- Rust
Published by jackh726 over 1 year ago
bigtools - pybigtools@v0.2.2
Full Changelog: https://github.com/jackh726/bigtools/compare/pybigtools@v0.2.1...pybigtools@v0.2.2
- Rust
Published by jackh726 over 1 year ago
bigtools - pybigtools@v0.2.1
Full Changelog: https://github.com/jackh726/bigtools/compare/pybigtools@v0.2.0...pybigtools@v0.2.1
- Rust
Published by jackh726 over 1 year ago
bigtools - pybigtools@v0.2.0
What's Changed
- Update citation by @nvictus in https://github.com/jackh726/bigtools/pull/40
- Fix behaviour of names argument in bigWigAverageOverBed of pybigtools. by @ghuls in https://github.com/jackh726/bigtools/pull/41
- Refactor pybigtools API by @jackh726 in https://github.com/jackh726/bigtools/pull/44
- Add bb test files by @nvictus in https://github.com/jackh726/bigtools/pull/46
- Granularize api tests by @nvictus in https://github.com/jackh726/bigtools/pull/47
Full Changelog: https://github.com/jackh726/bigtools/compare/pybigtools@v0.1.4...pybigtools@v0.2.0
- Rust
Published by jackh726 over 1 year ago
bigtools - v0.5.0
What's Changed
- Update citation by @nvictus in https://github.com/jackh726/bigtools/pull/40
- Fix behaviour of names argument in bigWigAverageOverBed of pybigtools. by @ghuls in https://github.com/jackh726/bigtools/pull/41
- Add more bigwigaverageoverbed stats by @ghuls in https://github.com/jackh726/bigtools/pull/42
- Refactor bigtools internals and API for writing by @jackh726 in https://github.com/jackh726/bigtools/pull/45
Full Changelog: https://github.com/jackh726/bigtools/compare/v0.4.3...v0.5.0
- Rust
Published by jackh726 over 1 year ago
bigtools - pybigtools@v0.1.4
What's Changed
- Update README.md by @nvictus in https://github.com/jackh726/bigtools/pull/31
- Add "version" package attribute by @ghuls in https://github.com/jackh726/bigtools/pull/32
- build: Add .cargo/config for project root
cargo buildon macos by @nvictus in https://github.com/jackh726/bigtools/pull/37
Full Changelog: https://github.com/jackh726/bigtools/compare/pybigtools@v0.1.3...pybigtools@v0.1.4
- Rust
Published by jackh726 almost 2 years ago
bigtools - v0.4.3
What's Changed
- Update README.md by @nvictus in https://github.com/jackh726/bigtools/pull/31
- Add "version" package attribute by @ghuls in https://github.com/jackh726/bigtools/pull/32
- build: Add .cargo/config for project root
cargo buildon macos by @nvictus in https://github.com/jackh726/bigtools/pull/37 - Add version flag
- Fix bigwigvaluesoverbed about
- Fix bigbedtobed newlines
- Add writesinglethreaded and writemultipass to BigBedWrite and use it in bedtobigbed
- Add section on building from source to README
- Remove section buffering for single-threaded bedtobigbed and bedgraphtobigwig
Full Changelog: https://github.com/jackh726/bigtools/compare/v0.4.2...v0.4.3
- Rust
Published by jackh726 almost 2 years ago
bigtools - pybigtools@v0.1.3
Fix creation of bbi files when threading is required
- Rust
Published by jackh726 almost 2 years ago
bigtools - pybigtools@v0.1.2
Binds bigtools v0.4.2 This release makes sure the LICENSE file is included in the source distribution.
Full Changelog: https://github.com/jackh726/bigtools/compare/pybigtools@v0.1.1...pybigtools@v0.1.2
- Rust
Published by nvictus almost 2 years ago
bigtools - pybigtools@v0.1.1
Full Changelog: https://github.com/jackh726/bigtools/compare/pybigtools@v0.1.0...pybigtools@v0.1.1
- Rust
Published by jackh726 about 2 years ago
bigtools - pybigtools@v0.1.0
initial pybigtools release
- Rust
Published by jackh726 about 2 years ago