Pycrostates - 0.6.1

What's Changed

• DOC: Fix project URL by @larsoner in https://github.com/vferat/pycrostates/pull/188

New Contributors

• @larsoner made their first contribution in https://github.com/vferat/pycrostates/pull/188

Full Changelog: https://github.com/vferat/pycrostates/compare/0.6.0...0.6.1

Scientific Software - Peer-reviewed - Python
Published by mscheltienne over 1 year ago

Pycrostates - 0.6.0

This release ensures compatibility with the up-coming MNE-Python 1.8 release.

Full Changelog: https://github.com/vferat/pycrostates/compare/0.5.0...0.6.0

Scientific Software - Peer-reviewed - Python
Published by mscheltienne over 1 year ago

Pycrostates - 0.5.0

• [ENH] Add auto information functions by @vferat and @Frederic-vW in https://github.com/vferat/pycrostates/pull/112
• Improve figure size and show argument in viz functions by @mscheltienne in https://github.com/vferat/pycrostates/pull/158

Full Changelog: https://github.com/vferat/pycrostates/compare/0.4.1...0.5.0

Scientific Software - Peer-reviewed - Python
Published by mscheltienne about 2 years ago

Pycrostates - 0.4.1

• Don't distribute pytest related files

Full Changelog: https://github.com/vferat/pycrostates/compare/0.4.0...0.4.1

Scientific Software - Peer-reviewed - Python
Published by mscheltienne over 2 years ago

Pycrostates - 0.4.0

What's Changed

• Add show_gradient parameter by @vferat in https://github.com/vferat/pycrostates/pull/111
• Add compatibility with MNE 1.6 by @mscheltienne in https://github.com/vferat/pycrostates/pull/120 and https://github.com/vferat/pycrostates/pull/124

Full Changelog: https://github.com/vferat/pycrostates/compare/0.3.0...0.4.0

Scientific Software - Peer-reviewed - Python
Published by mscheltienne over 2 years ago

Pycrostates - 0.3.0

What's Changed

• [ENH] Rework Changelog by @vferat in https://github.com/vferat/pycrostates/pull/86
• [JOSS] Editor review by @mscheltienne in https://github.com/vferat/pycrostates/pull/88
• Update readme with JOSS badge by @mscheltienne in https://github.com/vferat/pycrostates/pull/89
• [DOC] Improve documentation and module docstrings by @mscheltienne in https://github.com/vferat/pycrostates/pull/87
• [DOC] Add BibClean to format references.bib by @mscheltienne in https://github.com/vferat/pycrostates/pull/90
• [ENH] Add support for AAHC clustering by @rkobler in https://github.com/vferat/pycrostates/pull/92
• Add transition probabilities by @vferat in https://github.com/vferat/pycrostates/pull/91
• Compare projectors if MNE is above 1.2, fix matplotlib deprecation and drop support for Python 3.7 by @mscheltienne in https://github.com/vferat/pycrostates/pull/77
• [MNT] Run build and tests workflows on latest Python 3.11 by @mscheltienne in https://github.com/vferat/pycrostates/pull/100
• [MNT] Unpin matplotlib by @mscheltienne in https://github.com/vferat/pycrostates/pull/101
• Fix MNE-main and doc-build CI by @mscheltienne in https://github.com/vferat/pycrostates/pull/108
• BUGFIX and performance improvement in AAHC clustering by @rkobler in https://github.com/vferat/pycrostates/pull/107
• Improve logger and filldoc, copydoc and verbose decorator by @mscheltienne in https://github.com/vferat/pycrostates/pull/109
• Auto-label/order microstates maps by @vferat in https://github.com/vferat/pycrostates/pull/105
• Add applyspatialfilter by @vferat in https://github.com/vferat/pycrostates/pull/96

New Contributors

• @rkobler made their first contribution in https://github.com/vferat/pycrostates/pull/92

Full Changelog: https://github.com/vferat/pycrostates/compare/0.2.0...0.3.0

Scientific Software - Peer-reviewed - Python
Published by mscheltienne almost 3 years ago

Pycrostates - 0.2.0

What's Changed

• [DOC] Mention MNE installers by @mscheltienne in https://github.com/vferat/pycrostates/pull/55
• [DOC] Edit the versionadded and versionchanged flags from MNE docdict entries by @mscheltienne in https://github.com/vferat/pycrostates/pull/53
• Small typo fixes by @AJQuinn in https://github.com/vferat/pycrostates/pull/59
• Community friendly rework by @vferat in https://github.com/vferat/pycrostates/pull/44
• Logo proposal by @LouPlanchamp in https://github.com/vferat/pycrostates/pull/56
• docs: add LouPlanchamp as a contributor for design by @allcontributors in https://github.com/vferat/pycrostates/pull/68
• [DOC] Fix installation link in readme and improve documentation build by @mscheltienne in https://github.com/vferat/pycrostates/pull/58
• Fix default picks by @vferat in https://github.com/vferat/pycrostates/pull/66
• Add checkpicksuniqueness for extractgfp_peaks by @vferat in https://github.com/vferat/pycrostates/pull/73
• Add support for coordinate transformation to ChInfo by @mscheltienne in https://github.com/vferat/pycrostates/pull/71
• Load an identity transform by default if dev-head-t was not found by @mscheltienne in https://github.com/vferat/pycrostates/pull/76
• Add CHANGELOG by @vferat in https://github.com/vferat/pycrostates/pull/74
• Use invert=True instead of custom code in annotationsstarts_stops by @vferat in https://github.com/vferat/pycrostates/pull/79
• Bump actions/checkout from 2 to 3 by @dependabot in https://github.com/vferat/pycrostates/pull/80
• [Review] Improve documentation by @vferat in https://github.com/vferat/pycrostates/pull/81
• Add note about findpeaks in the docstring for extractgfp_peaks and improve glossary x-ref by @mscheltienne in https://github.com/vferat/pycrostates/pull/83
• [Paper] Change word to remove the 'replication' mention by @mscheltienne in https://github.com/vferat/pycrostates/pull/84

New Contributors

• @AJQuinn made their first contribution in https://github.com/vferat/pycrostates/pull/59
• @LouPlanchamp made their first contribution in https://github.com/vferat/pycrostates/pull/56

Full Changelog: https://github.com/vferat/pycrostates/compare/0.1.2...0.2.0

Scientific Software - Peer-reviewed - Python
Published by mscheltienne over 3 years ago

Pycrostates - 0.1.2

This is a bug-fix release to include the .jinja HTML templates in the package.

What's Changed

• Add dependabot to update actions in github workflows by @mscheltienne in https://github.com/vferat/pycrostates/pull/46
• Bump py-actions/flake8 from 1 to 2 by @dependabot in https://github.com/vferat/pycrostates/pull/49
• Bump actions/setup-python from 3 to 4 by @dependabot in https://github.com/vferat/pycrostates/pull/48
• Bump actions/upload-artifact from 1 to 3 by @dependabot in https://github.com/vferat/pycrostates/pull/47
• Add note for mne.io.read_raw_eeglab calls requiring pymatreader by @mscheltienne in https://github.com/vferat/pycrostates/pull/52
• Package jinja files in the tarball and the wheel by @mscheltienne in https://github.com/vferat/pycrostates/pull/54

Full Changelog: https://github.com/vferat/pycrostates/compare/0.1.1...0.1.2

Scientific Software - Peer-reviewed - Python
Published by mscheltienne over 3 years ago

Pycrostates - 0.1.1

Use scikit-learn instead of sklearn

Scientific Software - Peer-reviewed - Python
Published by vferat over 3 years ago

Pycrostates - 0.1.0

Initial Release

What's Changed

• Refactor clustering by @mscheltienne in https://github.com/vferat/pycrostates/pull/14
• Bump version to .dev by @mscheltienne in https://github.com/vferat/pycrostates/pull/18
• Update BaseCluster.reorder() to also reorder _BaseCluster.labels_ by @vferat in https://github.com/vferat/pycrostates/pull/19
• Add warning when retrieving path for lemon dataset while pymatreader is not installed by @mscheltienne in https://github.com/vferat/pycrostates/pull/22
• Test against dev version of MNE by @vferat in https://github.com/vferat/pycrostates/pull/23
• Add ChInfo class to hold channel-related information only by @mscheltienne in https://github.com/vferat/pycrostates/pull/21
• Add repr html by @vferat in https://github.com/vferat/pycrostates/pull/26
• Improvements to viz by @mscheltienne in https://github.com/vferat/pycrostates/pull/27
• rename clusterSnames to clusternames by @mscheltienne in https://github.com/vferat/pycrostates/pull/28
• Add I/O from and towards fiff format by @mscheltienne in https://github.com/vferat/pycrostates/pull/29
• docs: add mscheltienne as a contributor for doc, ideas, infra, maintenance, projectManagement, review, test by @allcontributors in https://github.com/vferat/pycrostates/pull/32
• Update Segmentation by @vferat in https://github.com/vferat/pycrostates/pull/30
• docs: add vferat as a contributor for doc, ideas, infra, maintenance, projectManagement, review, test by @allcontributors in https://github.com/vferat/pycrostates/pull/33
• MRG: Add type hints by @mscheltienne in https://github.com/vferat/pycrostates/pull/34
• Use black and isort for formating by @mscheltienne in https://github.com/vferat/pycrostates/pull/35
• Rework preprocessing by @vferat in https://github.com/vferat/pycrostates/pull/36
• Rename n epochs by @vferat in https://github.com/vferat/pycrostates/pull/38
• [MNT] Move package configuration and dependencies to pyproject.toml (PEP 518, 621) by @mscheltienne in https://github.com/vferat/pycrostates/pull/39
• Dev metrics by @vferat in https://github.com/vferat/pycrostates/pull/37
• Try to fix test CI by @mscheltienne in https://github.com/vferat/pycrostates/pull/41
• Add group level analysis tutorials by @vferat in https://github.com/vferat/pycrostates/pull/42
• [DOC] Improvement to the docstrings and to the docdict by @mscheltienne in https://github.com/vferat/pycrostates/pull/43
• [Paper] Submission by @vferat in https://github.com/vferat/pycrostates/pull/40

Full Changelog: https://github.com/vferat/pycrostates/compare/v0.0.0-alpha...0.1.0

Scientific Software - Peer-reviewed - Python
Published by vferat over 3 years ago

Pycrostates - pre-release

For pre-release compatibility only.

Scientific Software - Peer-reviewed - Python
Published by vferat almost 4 years ago