covid19.analytics - Official release of "covid19.analytics" version 2.1

• linking to Zenodo and JOSS

Scientific Software - Peer-reviewed - R
Published by mponce0 about 5 years ago

covid19.analytics - covid19.analytics Version 2.1

More data sources added _ ver 2.1 (Feb/Mar 2021) - Vaccination data, from OWID - Testing data, from OWID - pandemics data, from Visual Capitalist infographics - adding flags for having conditional testing (in unit testing module)

Adding more data sources _ ver 2.01/unreleased/ (Oct 2020) - New covid19.Toronto_OD.data fn, to obtain data from Open Data Toronto - New covid19.Canada.data fn, to obtain data from Health Canada

Scientific Software - Peer-reviewed - R
Published by mponce0 about 5 years ago

covid19.analytics - covid19.analytics Version 2.0

Several new features added _ ver 2.0 - New dashboard interface, via covid19Explorer fn - local data restructured to be stored in RDS format instead of CVS - local fasta genomics data, only available on development version due to CRAN restrictions in packages' size

Scientific Software - Peer-reviewed - R
Published by mponce0 over 5 years ago

covid19.analytics - covid19.analytics Version 2.0 (Beta)

pre-release ver 2.0

Scientific Software - Peer-reviewed - R
Published by mponce0 over 5 years ago

covid19.analytics - covid19.analytics Version 1.2 (beta)

covid19.analytics Version 1.2 (beta)

Several new features added _ ver 1.2 (Aug 2020): - New genomic functions supporting the retrieval of nucleotides, proteins, FASTA and phylogenetic tree from NCBI. - Adding a new function, sweep.SIR.models for generating a series of models based on a range for the starting date t0 - Added more checks for integrity/consistency checks: critical columns, quantifiable columns, etc. - Added a nullify.data fn, for removing inconsistent/incomplete entries in the data - Added a new estimateRRs fn, for computing rolling estimates for fatality and recovery rates

Scientific Software - Peer-reviewed - R
Published by mponce0 over 5 years ago

covid19.analytics - covid19.analytics Version 1.1.1

Several new features and bugs fixes _ ver 1.1.1 (July 2020) - added new geographical categories to select data per continents, implemented via geographicalRegions() fn - added tests cases - geneate.SIR.model()/plt.SIR.model(): added plotting of time derivatives and "force of infection" - covid19.Toronto.data(): updated to handle new format of the data, 3 categories in columns - covid19.Toronto.data(): can return original data as reported by the city in google-docs in a list format - covid19.Toronto.data(): improved reading of Toronto data to protect possible variations in the reported data - added new argument 'interactive.display' for functions that generate interactive figures, eg. live.map(), totals.plt(), plt.SIR.model(), itrends(); for turning on/off the display of the figure - fixed a few bugs in itrends: failing when not arguments or only one geo.locn, were specified - fixed data integrity functions not being exported

Scientific Software - Peer-reviewed - R
Published by mponce0 almost 6 years ago

covid19.analytics - covid19.analytics Version 1.1

Several new features _ ver 1.1 - added integrity and consistency check fns --integrity.check/consistency.check/data.checks-- - added "geo.loc" argument for report.summary() fn - added a couple of additional arguments to allow for customization of live.map() - added new options and function to retrieve US specific TimeSeries datasets: "ts-confirmed-us" and "ts-deaths-us" & covid19.US.data() - added new option and function to retrieve "Toronto" data: "ts-Toronto" & covid19.Toronto.data() - added more protection to growth.rate() and confidence bands drawing, to avoid failing plots with missing or inconsistency data - added trend functions: single.trend(), mtrends() and itrends()

Scientific Software - Peer-reviewed - R
Published by mponce0 about 6 years ago

covid19.analytics - covid19.analytics Version 1.0.1

A couple of bugs fixed, affecting the growth.rate() and plot.SIR.model() functions, the latter has been renamed to plt.SIR.model(). Further features added to the report.summary() and totals.plt() functions.

Scientific Software - Peer-reviewed - R
Published by mponce0 about 6 years ago

covid19.analytics - covid19.analytics Version 1.0

Scientific Software - Peer-reviewed - R
Published by mponce0 about 6 years ago