peka-eclip
Download and prepare ENCODE eCLIP raw fastq for processing with the nf-core/clipseq pipeline
Science Score: 44.0%
This score indicates how likely this project is to be science-related based on various indicators:
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✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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○Academic email domains
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (2.9%) to scientific vocabulary
Keywords
clip
nf-core
Last synced: 6 months ago
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Repository
Download and prepare ENCODE eCLIP raw fastq for processing with the nf-core/clipseq pipeline
Basic Info
Statistics
- Stars: 1
- Watchers: 2
- Forks: 3
- Open Issues: 0
- Releases: 0
Topics
clip
nf-core
Created over 4 years ago
· Last pushed about 4 years ago
Metadata Files
Readme
License
Citation
README.md
peka-eclip
This repository contains scripts to:
- Download raw ENCODE eCLIP fastq files
- Pre-process them to ensure they can be run through the nf-core/clipseq pipeline
- Run them through the nf-core/clipseq pipeline
Owner
- Name: Ulelab
- Login: ulelab
- Kind: organization
- Location: London
- Repositories: 10
- Profile: https://github.com/ulelab
Citation (citation.cff)
cff-version: 1.2.0 message: "If you use this software, please cite it as below." authors: - family-names: "Chakrabarti" given-names: "Anob M." title: "peka-eclip" version: 1.0.0 date-released: 2021-12-06 url: "https://github.com/ulelab/peka-eclip"