Recent Releases of dacapo
dacapo - v0.3.5
What's Changed
- Road map by @pattonw in https://github.com/janelia-cellmap/dacapo/pull/330
- Data conventions by @pattonw @mzouink in https://github.com/janelia-cellmap/dacapo/pull/329 - https://github.com/janelia-cellmap/dacapo/pull/334 - https://github.com/janelia-cellmap/dacapo/pull/335
- Tests + fixes v0 3 5 by @pattonw @mzouink in https://github.com/janelia-cellmap/dacapo/pull/338 - https://github.com/janelia-cellmap/dacapo/pull/346 - https://github.com/janelia-cellmap/dacapo/pull/327
Full Changelog: https://github.com/janelia-cellmap/dacapo/compare/v0.3.2...v0.3.5
- Python
Published by mzouink over 1 year ago
dacapo - v0.3.2
What's Changed
- force numpy new version, fix bug by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/220
- Run load starter as option by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/225
- Update gunpowder_trainer.py by @rhoadesScholar in https://github.com/janelia-cellmap/dacapo/pull/235
- Fix starter by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/227
- Dev/blockwise by @rhoadesScholar in https://github.com/janelia-cellmap/dacapo/pull/228
- mo more validate_run by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/224
- [WIP] non-local data by @d-v-b in https://github.com/janelia-cellmap/dacapo/pull/173
- S3 Support by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/238
- Lazy run by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/242
- Format Python code with psf/black push by @github-actions in https://github.com/janelia-cellmap/dacapo/pull/241
- Update tests.yaml - timeout by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/243
- Dockerize the docker dockering by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/245
- postprocess example by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/248
- Update cosem_example.ipynb by @rhoadesScholar in https://github.com/janelia-cellmap/dacapo/pull/249
- type fix for cnnectomenetconfig by @gbhuang in https://github.com/janelia-cellmap/dacapo/pull/250
- S3 - in progress by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/247
- Dev/main by @rhoadesScholar in https://github.com/janelia-cellmap/dacapo/pull/221
- update pytest to 8.0.0 by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/256
- Specify resolution with sequences by @vaxenburg in https://github.com/janelia-cellmap/dacapo/pull/251
- support no cli call by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/262
- Docs by @rhoadesScholar in https://github.com/janelia-cellmap/dacapo/pull/269
- main by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/271
- Rescaled array by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/270
- Examples/segment blockwise script by @rhoadesScholar in https://github.com/janelia-cellmap/dacapo/pull/273
- feat: ✨ Add numlsdvoxel to affinities task config. by @rhoadesScholar in https://github.com/janelia-cellmap/dacapo/pull/274
- perf: ⚡️ Add found options file to the environment variable. by @rhoadesScholar in https://github.com/janelia-cellmap/dacapo/pull/277
- better datasplit generator by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/272
- use negative crops + better neutoglancer by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/267
- fix: :bug: fix how file stats are updated by @davidackerman in https://github.com/janelia-cellmap/dacapo/pull/265
- Validate patch by @rhoadesScholar in https://github.com/janelia-cellmap/dacapo/pull/278
- fix new pytorch error by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/284
- Fix small typos by @atc3 in https://github.com/janelia-cellmap/dacapo/pull/286
- feat: ✨ Add more extensive pipeline visualize for GunpowderTrainer/Run. by @rhoadesScholar in https://github.com/janelia-cellmap/dacapo/pull/287
- Feat: datasplit limit validation size by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/289
- Add bind parameters to neuroglancer instantiations by @atc3 in https://github.com/janelia-cellmap/dacapo/pull/297
- Fix local predict by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/305
- Basic tutorial by @pattonw in https://github.com/janelia-cellmap/dacapo/pull/310
- Update gunpowder_trainer.py to swap to(device) and float() by @psobolewskiPhD in https://github.com/janelia-cellmap/dacapo/pull/312
- feat: ✨ Add support for training on Apple M1/M2/M3 (mps) devices. by @rhoadesScholar in https://github.com/janelia-cellmap/dacapo/pull/311
- Add optional probabilities to augmentations by @vaxenburg in https://github.com/janelia-cellmap/dacapo/pull/314
- Funlib persistence update by @pattonw in https://github.com/janelia-cellmap/dacapo/pull/322
New Contributors
- @avweigel made their first contribution in https://github.com/janelia-cellmap/dacapo/pull/222
- @d-v-b made their first contribution in https://github.com/janelia-cellmap/dacapo/pull/173
- @gbhuang made their first contribution in https://github.com/janelia-cellmap/dacapo/pull/250
- @vaxenburg made their first contribution in https://github.com/janelia-cellmap/dacapo/pull/251
- @atc3 made their first contribution in https://github.com/janelia-cellmap/dacapo/pull/286
- @psobolewskiPhD made their first contribution in https://github.com/janelia-cellmap/dacapo/pull/312
Full Changelog: https://github.com/janelia-cellmap/dacapo/compare/v0.3.0...v0.3.2
- Python
Published by mzouink over 1 year ago
dacapo - v0.3.0
What's Changed
- Dev/tests by @rhoadesScholar in https://github.com/janelia-cellmap/dacapo/pull/213
- Dev/pypi by @rhoadesScholar in https://github.com/janelia-cellmap/dacapo/pull/212
- Dev/main by @rhoadesScholar in https://github.com/janelia-cellmap/dacapo/pull/218
- Dev/main by @mzouink in https://github.com/janelia-cellmap/dacapo/pull/219
Full Changelog: https://github.com/janelia-cellmap/dacapo/compare/v0.2.2...v0.3.0
- Python
Published by rhoadesScholar almost 2 years ago