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bpbounds

R package implementing nonparametric bounds for the ACE due to Balke and Pearl, JASA, 1997

https://github.com/remlapmot/bpbounds

Science Score: 67.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ✓
    CITATION.cff file
    Found CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ✓
    DOI references
    Found 5 DOI reference(s) in README
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 2 committers (50.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (8.5%) to scientific vocabulary

Keywords

ace average-causal-effect bounds instrumental-variable iv mendelian mendelian-randomisation mendelian-randomization mendelianrandomisation mendelianrandomization mr nonparametric nonparametric-bounds pearl r shiny
Last synced: 6 months ago · JSON representation ·

Repository

R package implementing nonparametric bounds for the ACE due to Balke and Pearl, JASA, 1997

Basic Info
Statistics
  • Stars: 0
  • Watchers: 2
  • Forks: 1
  • Open Issues: 1
  • Releases: 7
Topics
ace average-causal-effect bounds instrumental-variable iv mendelian mendelian-randomisation mendelian-randomization mendelianrandomisation mendelianrandomization mr nonparametric nonparametric-bounds pearl r shiny
Created over 7 years ago · Last pushed 6 months ago
Metadata Files
Readme Changelog License Citation

README.md

bpbounds: Nonparametric bounds for the average causal effect for one-sample (bivariate) and two-sample (trivariate) data

R-CMD-check Coverage status CRAN status RStudio_CRAN_mirror_downloads_badge r-universe <!-- badges: end -->

R package implementing the nonparametric bounds for the average causal effect of Balke and Pearl (1997).

Installation

Install the released version of bpbounds from CRAN:

r install.packages("bpbounds")

or from the MRCIEU R-universe

r install.packages("bpbounds", repos = c("https://mrcieu.r-universe.dev", "https://cloud.r-project.org"))

Or install the development version from my r-universe

r install.packages("bpbounds", repos = c("https://remlapmot.r-universe.dev", "https://cloud.r-project.org"))

Or install the development version from GitHub with:

``` r

install.packages("remotes")

remotes::install_github("remlapmot/bpbounds") ```

Shiny App

There is a Shiny app demonstrating the package at: https://remlapmot.shinyapps.io/bpbounds/.

Package website

The helpfiles and vignette are shown on the package website at: https://remlapmot.github.io/bpbounds/.

Authors

Tom Palmer (maintainer, tom.palmer@bristol.ac.uk), Roland Ramsahai, Vanessa Didelez, Nuala Sheehan.

References

Balke A, Pearl J. Bounds on Treatment Effects from studies with imperfect compliance. Journal of the American Statistical Association, 1997, 92, 439, 1171-1176, doi: 10.1080/01621459.1997.10474074.

Owner

  • Name: Tom Palmer
  • Login: remlapmot
  • Kind: user

Averaging statistician ...

Citation (CITATION.cff) 

cff-version: 1.2.0
message: "If you use this software, please cite it as below."
authors:
- family-names: "Palmer"
  given-names: "Tom"
  orcid: "https://orcid.org/0000-0003-4655-4511"
- family-names: "Ramsahai"
  given-names: "Roland"
  orcid: "https://orcid.org/0000-0002-7349-1977"
- family-names: "Didelez"
  given-names: "Vanessa"
  orcid: "https://orcid.org/0000-0001-8587-7706"
- family-names: "Sheehan"
  given-names: "Nuala"
  orcid: "https://orcid.org/0000-0001-9094-2605"
title: "bpbounds: R package implementing Balke-Pearl bounds for the average causal effect"
type: software
version: 0.1.4
date-released: 2020-01-21
url: "https://remlapmot.github.io/bpbounds/index.html"
repository-code: "https://github.com/remlapmot/bpbounds"
license: GPL-3.0

GitHub Events

Total
  • Push event: 22
  • Create event: 1
Last Year
  • Push event: 22
  • Create event: 1

Committers

Last synced: about 2 years ago

All Time
  • Total Commits: 211
  • Total Committers: 2
  • Avg Commits per committer: 105.5
  • Development Distribution Score (DDS): 0.038
Past Year
  • Commits: 44
  • Committers: 1
  • Avg Commits per committer: 44.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Tom Palmer r****t@h****m 203
Palmer p****m@l****k 8
Committer Domains (Top 20 + Academic)
lancaster.ac.uk: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 1
  • Total pull requests: 7
  • Average time to close issues: N/A
  • Average time to close pull requests: 2 minutes
  • Total issue authors: 1
  • Total pull request authors: 1
  • Average comments per issue: 2.0
  • Average comments per pull request: 0.29
  • Merged pull requests: 7
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • rmtrane (1)
Pull Request Authors
  • remlapmot (7)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 677 last-month
  • Total docker downloads: 21,613
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 6
  • Total maintainers: 1
cran.r-project.org: bpbounds

Nonparametric Bounds for the Average Causal Effect Due to Balke and Pearl and Extensions

  • Versions: 6
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 677 Last month
  • Docker Downloads: 21,613
Rankings
Forks count: 21.9%
Dependent packages count: 29.8%
Average: 34.3%
Stargazers count: 35.2%
Dependent repos count: 35.5%
Downloads: 49.3%
Maintainers (1)
remlapmot@hotmail.com
Last synced: 6 months ago

Dependencies

DESCRIPTION cran
  • R >= 3.5.0 depends
  • methods * imports
  • dplyr * suggests
  • knitr * suggests
  • rmarkdown * suggests
  • shiny * suggests
  • testthat * suggests
  • tidyr * suggests
.github/workflows/check-full.yaml actions
  • actions/checkout v3 composite
  • r-lib/actions/check-r-package v2 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/pkgdown.yaml actions
  • JamesIves/github-pages-deploy-action v4.4.1 composite
  • actions/checkout v3 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/test-coverage.yaml actions
  • actions/checkout v3 composite
  • actions/upload-artifact v3 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite