Releases | Open Source Science

What's Changed

142 optionalimporterror when running on linux with python 3.12 by @JannisStraus in https://github.com/UMEssen/FHIR-PYrate/pull/143
fix dependabot security issues

Full Changelog: https://github.com/UMEssen/FHIR-PYrate/compare/v0.2.2...v0.2.3

- Python
Published by JannisStraus 8 months ago

What's Changed

Updated core dependencies to modern versions * numpy → ^2.0.0 * pandas → ^2.0.0

Pre-commit Hooks * Refined and adjusted .pre-commit-config.yaml for better consistency. * Improved formatting, linting, and code quality enforcement across the repo.

Typing Improvements * Improved static type annotations throughout the codebase. * Reduced mypy warnings and enabled stricter checks for safer refactoring.

New Contributors

@luckfamousa made their first contribution in https://github.com/UMEssen/FHIR-PYrate/pull/136
@JannisStraus made their first contribution in https://github.com/UMEssen/FHIR-PYrate/pull/138

Full Changelog: https://github.com/UMEssen/FHIR-PYrate/compare/v0.2.1...v0.2.2

- Python
Published by JannisStraus 8 months ago

What's Changed

59 multiprocessing for dicomdownloader by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/129
Change all dates to utc by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/130
Update fhirpathpy version by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/135

Full Changelog: https://github.com/UMEssen/FHIR-PYrate/compare/v0.2.0...v0.2.1

- Python
Published by giuliabaldini over 2 years ago

Much has changed! Some parameters names have been deprecated and others have been added, below there is a summary of all the pull requests. The most important changes are: - Some fuctions have been added to avoid using query_to_dataframe. - Bundle caching - If multiple resources are queried, a dictionary with multiple DataFrames is returned. - Read operations are now supported

What's Changed

Update to 3.8 because of numpy security update by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/64
Convert basic bundle collection to generator by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/60
Add history support by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/74
Add handling for dataframe functions using the _id parameter by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/72
Fix the FHIR server URL bug for local servers by introducing a new variable that contains the domain by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/78
Allow to specify multiple query arguments in df contraints by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/76
Specify Package Version Inside Package by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/80
Allow to turn off checks for dicom download by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/85
Add resource name to the TQDM description by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/88
Merge trade rows for dataframe and trade rows for dataframe with ref by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/89
Allow addition of any column to the trade rows for dataframe result by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/90
Convert logging.warn to warnings when appropriate by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/105
Convert received resources from read operations to bundles for consistency by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/106
Smarter bundle caching by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/107
Make current beta compatible with 0.1.0 by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/112
Fix efficiency problem with merge on by returning dataframes @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/113
Make fhirpathpy import greedy by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/116
Support for custom certificates needed by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/119
Improve documentation by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/122

Full Changelog: https://github.com/UMEssen/FHIR-PYrate/compare/v0.1.0...v0.2.0

- Python
Published by giuliabaldini almost 3 years ago

fhir-pyrate - v0.2.0-beta.9

What's Changed

Make fhirpathpy import greedy by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/116

Full Changelog: https://github.com/UMEssen/FHIR-PYrate/compare/v0.2.0-beta.8...v0.2.0-beta.9

- Python
Published by giuliabaldini almost 3 years ago

fhir-pyrate - v0.2.0-beta.8

What's Changed

94 efficiency problem with merge on by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/113

Full Changelog: https://github.com/UMEssen/FHIR-PYrate/compare/v0.2.0-beta.7...v0.2.0-beta.8

- Python
Published by giuliabaldini about 3 years ago

fhir-pyrate - v0.2.0-beta.7

What's Changed

111 make current beta compatible with 0.1.0 by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/112

Full Changelog: https://github.com/UMEssen/FHIR-PYrate/compare/v0.2.0-beta.6...v0.2.0-beta.7

- Python
Published by giuliabaldini about 3 years ago

fhir-pyrate - v0.2.0-beta.6

What's Changed

Convert logging.warn to warnings when appropriate by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/105
Convert received resources from read operations to bundles for consistency by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/106
Smarter bundle caching by @giuliabaldini in https://github.com/UMEssen/FHIR-PYrate/pull/107

Full Changelog: https://github.com/UMEssen/FHIR-PYrate/compare/v0.2.0-beta.5...v0.2.0-beta.6

- Python
Published by giuliabaldini about 3 years ago