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spatial-transcriptomics

https://github.com/smcclatchy/spatial-transcriptomics

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

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    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
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    DOI references
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    Academic publication links
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    Scientific vocabulary similarity
    Low similarity (1.7%) to scientific vocabulary

Keywords

10x-genomics spatial-transcriptomics
Last synced: 6 months ago · JSON representation

Repository

Basic Info
Statistics
  • Stars: 0
  • Watchers: 4
  • Forks: 3
  • Open Issues: 28
  • Releases: 0
Topics
10x-genomics spatial-transcriptomics
Created over 2 years ago · Last pushed 6 months ago
Metadata Files
Readme Contributing License Code of conduct Citation

README.md

Spatial Transcriptomics

This lesson follows a spatial transcriptomics workflow using data from the 10X Genomics Visium platform.

Lesson website: https://smcclatchy.github.io/spatial-transcriptomics/
Lesson maintainers:
Credits / acknowledgments: Sue McClatchy, Dan Gatti, Antonios Somarakis, Brian White, Elaheh Alizadeh, Gary Churchill

Owner

  • Name: Sue McClatchy
  • Login: smcclatchy
  • Kind: user
  • Location: Bar Harbor, Maine
  • Company: @TheJacksonLaboratory

I do bioinformatics @TheJacksonLaboratory.

GitHub Events

Total
  • Issues event: 1
  • Delete event: 3
  • Issue comment event: 6
  • Push event: 78
  • Pull request event: 11
  • Fork event: 1
  • Create event: 3
Last Year
  • Issues event: 1
  • Delete event: 3
  • Issue comment event: 6
  • Push event: 78
  • Pull request event: 11
  • Fork event: 1
  • Create event: 3

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 0
  • Total pull requests: 7
  • Average time to close issues: N/A
  • Average time to close pull requests: 7 days
  • Total issue authors: 0
  • Total pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.57
  • Merged pull requests: 4
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 7
  • Average time to close issues: N/A
  • Average time to close pull requests: 7 days
  • Issue authors: 0
  • Pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.57
  • Merged pull requests: 4
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • bswhite (9)
  • smcclatchy (8)
  • dmgatti (7)
Pull Request Authors
  • smcclatchy (7)
  • Elaheh-Alizadeh (1)
  • milanmlft (1)
Top Labels
Issue Labels
Pull Request Labels
type: package cache (5) type: template and tools (2)

Dependencies

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