madrat
R package | May All Data be Reproducible and Transparent (MADRaT)
Science Score: 67.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
✓CITATION.cff file
Found CITATION.cff file -
✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
✓DOI references
Found 7 DOI reference(s) in README -
✓Academic publication links
Links to: zenodo.org -
○Committers with academic emails
-
○Institutional organization owner
-
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (13.5%) to scientific vocabulary
Keywords from Contributors
Repository
R package | May All Data be Reproducible and Transparent (MADRaT)
Basic Info
- Host: GitHub
- Owner: pik-piam
- License: other
- Language: R
- Default Branch: master
- Homepage: https://cran.r-project.org/web/packages/madrat/index.html
- Size: 1.71 MB
Statistics
- Stars: 16
- Watchers: 2
- Forks: 43
- Open Issues: 12
- Releases: 5
Metadata Files
README.md
May All Data be Reproducible and Transparent (MADRaT) *
R package madrat, version 3.23.1
Purpose and Functionality
Provides a framework which should improve reproducibility and transparency in data processing. It provides functionality such as automatic meta data creation and management, rudimentary quality management, data caching, work-flow management and data aggregation. * The title is a wish not a promise. By no means we expect this package to deliver everything what is needed to achieve full reproducibility and transparency, but we believe that it supports efforts in this direction.
Installation
For installation of the most recent package version an additional repository has to be added in R:
r
options(repos = c(CRAN = "@CRAN@", pik = "https://rse.pik-potsdam.de/r/packages"))
The additional repository can be made available permanently by adding the line above to a file called .Rprofile stored in the home folder of your system (Sys.glob("~") in R returns the home directory).
After that the most recent version of the package can be installed using install.packages:
r
install.packages("madrat")
Package updates can be installed using update.packages (make sure that the additional repository has been added before running that command):
r
update.packages()
Tutorial
The package comes with vignettes describing the basic functionality of the package and how to use it. You can load them with the following command (the package needs to be installed):
r
vignette("madrat-caching") # Data caching in madrat
vignette("madrat-puc") # Portable unagreggated collections (PUCs) in MADRaT
vignette("madrat") # Data preparation with madrat
Questions / Problems
In case of questions / problems please contact Jan Philipp Dietrich dietrich@pik-potsdam.de.
Citation
To cite package madrat in publications use:
Dietrich J, Sauer P, Baumstark L, Wirth S, Giannousakis A, Rodrigues R, Bodirsky B, Leip D, Kreidenweis U, Klein D, Rein P (2025). "madrat: May All Data be Reproducible and Transparent (MADRaT) *." doi:10.5281/zenodo.1115490 https://doi.org/10.5281/zenodo.1115490, Version: 3.23.1, https://github.com/pik-piam/madrat.
A BibTeX entry for LaTeX users is
latex
@Misc{,
title = {madrat: May All Data be Reproducible and Transparent (MADRaT) *},
author = {Jan Philipp Dietrich and Pascal Sauer and Lavinia Baumstark and Stephen Wirth and Anastasis Giannousakis and Renato Rodrigues and Benjamin Leon Bodirsky and Debbora Leip and Ulrich Kreidenweis and David Klein and Patrick Rein},
doi = {10.5281/zenodo.1115490},
date = {2025-08-08},
year = {2025},
url = {https://github.com/pik-piam/madrat},
note = {Version: 3.23.1},
}
Owner
- Name: Potsdam Integrated Assessment Modelling (PIAM)
- Login: pik-piam
- Kind: organization
- Location: Potsdam Institute for Climate Impact Research (PIK), Germany
- Website: https://www.pik-potsdam.de/
- Repositories: 50
- Profile: https://github.com/pik-piam
Tools developed for use with data and models related to PIK's research.
Citation (CITATION.cff)
cff-version: 1.2.0 message: If you use this software, please cite it using the metadata from this file. type: software title: 'madrat: May All Data be Reproducible and Transparent (MADRaT) *' version: 3.23.1 date-released: '2025-08-08' abstract: Provides a framework which should improve reproducibility and transparency in data processing. It provides functionality such as automatic meta data creation and management, rudimentary quality management, data caching, work-flow management and data aggregation. * The title is a wish not a promise. By no means we expect this package to deliver everything what is needed to achieve full reproducibility and transparency, but we believe that it supports efforts in this direction. authors: - family-names: Dietrich given-names: Jan Philipp email: dietrich@pik-potsdam.de orcid: https://orcid.org/0000-0002-4309-6431 affiliation: Potsdam Institute for Climate Impact Research - family-names: Sauer given-names: Pascal email: pascal.sauer@pik-potsdam.de affiliation: Potsdam Institute for Climate Impact Research - family-names: Baumstark given-names: Lavinia email: lavinia@pik-potsdam.de affiliation: Potsdam Institute for Climate Impact Research - family-names: Wirth given-names: Stephen email: wirth@pik-potsdam.de affiliation: Potsdam Institute for Climate Impact Research - family-names: Giannousakis given-names: Anastasis email: giannou@pik-potsdam.de - family-names: Rodrigues given-names: Renato email: Renato.Rodrigues@pik-potsdam.de affiliation: Potsdam Institute for Climate Impact Research - family-names: Bodirsky given-names: Benjamin Leon email: bodirsky@pik-potsdam.de affiliation: Potsdam Institute for Climate Impact Research - family-names: Leip given-names: Debbora email: leip@pik-potsdam.de affiliation: Potsdam Institute for Climate Impact Research - family-names: Kreidenweis given-names: Ulrich email: kreidenweis@pik-potsdam.de - family-names: Klein given-names: David email: dklein@pik-potsdam.de affiliation: Potsdam Institute for Climate Impact Research - family-names: Rein given-names: Patrick email: patrick.rein@pik-potsdam.de orcid: https://orcid.org/0000-0001-9454-8381 affiliation: Potsdam Institute for Climate Impact Research license: BSD-2-Clause keywords: - tool repository-code: https://github.com/pik-piam/madrat doi: 10.5281/zenodo.1115490
GitHub Events
Total
- Issues event: 4
- Watch event: 2
- Issue comment event: 43
- Push event: 24
- Pull request review comment event: 55
- Pull request review event: 75
- Pull request event: 52
- Fork event: 8
Last Year
- Issues event: 4
- Watch event: 2
- Issue comment event: 43
- Push event: 24
- Pull request review comment event: 55
- Pull request review event: 75
- Pull request event: 52
- Fork event: 8
Committers
Last synced: about 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Jan Philipp Dietrich | d****h@p****e | 445 |
| Pascal Führlich | p****h@p****e | 202 |
| David Klein | d****n@p****e | 34 |
| Stephen Bi | s****b@p****e | 24 |
| Anastasis Giannousakis | 1****u | 18 |
| Renato Rodrigues | r****o@p****e | 11 |
| Falk Benke | f****e@p****e | 11 |
| Michaja Pehl | p****l@p****e | 9 |
| Mika Pflüger | m****r@p****e | 9 |
| Kristine Karstens | k****s@p****e | 9 |
| Lavinia Baumstark | b****k@p****m | 7 |
| caviddhen | d****n@p****e | 7 |
| Lavinia Baumstark | b****k@p****e | 7 |
| stwirth | w****h@p****e | 5 |
| Alois Dirnaichner | a****i@d****m | 4 |
| David Chen | 3****n | 3 |
| Baseer | b****r@i****u | 3 |
| Debbora Leip | l****p@p****e | 3 |
| Steve Bi | s****i@p****e | 3 |
| Bjoern Soergel | s****l@p****e | 2 |
| David Chen | d****h@l****e | 2 |
| florianh | h****r@p****e | 2 |
| FeBeier | f****r@p****e | 2 |
| Baseer Baheer | w****r | 1 |
| CB | b****m@p****e | 1 |
| mishko | s****c@p****e | 1 |
| pre-commit-ci[bot] | 6****] | 1 |
| robinhasse | r****r@p****e | 1 |
| Baseer Baheer | b****r@a****l | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 14
- Total pull requests: 154
- Average time to close issues: about 2 months
- Average time to close pull requests: 7 days
- Total issue authors: 6
- Total pull request authors: 20
- Average comments per issue: 4.0
- Average comments per pull request: 0.32
- Merged pull requests: 134
- Bot issues: 0
- Bot pull requests: 6
Past Year
- Issues: 2
- Pull requests: 21
- Average time to close issues: 4 days
- Average time to close pull requests: 4 days
- Issue authors: 1
- Pull request authors: 6
- Average comments per issue: 6.0
- Average comments per pull request: 0.24
- Merged pull requests: 13
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- 0UmfHxcvx5J7JoaOhFSs5mncnisTJJ6q (11)
- fbenke-pik (1)
- moulai (1)
- robinhasse (1)
- Loisel (1)
- orichters (1)
- caviddhen (1)
- mikapfl (1)
Pull Request Authors
- tscheypidi (46)
- pfuehrlich-pik (43)
- pascal-sauer (31)
- fbenke-pik (12)
- pre-commit-ci[bot] (8)
- 0UmfHxcvx5J7JoaOhFSs5mncnisTJJ6q (7)
- codeZeilen (4)
- dklein-pik (3)
- caviddhen (3)
- deleip (2)
- flohump (2)
- robinhasse (2)
- Loisel (2)
- orichters (2)
- johanneskoch94 (2)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- cran 306 last-month
- Total docker downloads: 42,005
- Total dependent packages: 0
- Total dependent repositories: 45
- Total versions: 13
- Total maintainers: 1
cran.r-project.org: madrat
May All Data be Reproducible and Transparent (MADRaT) *
- Homepage: https://github.com/pik-piam/madrat
- Documentation: http://cran.r-project.org/web/packages/madrat/madrat.pdf
- License: BSD_2_clause + file LICENSE
-
Latest release: 3.15.6
published about 1 year ago
Rankings
Maintainers (1)
Dependencies
- R >= 2.10.0 depends
- magclass >= 5.7.0 depends
- Matrix * imports
- callr * imports
- digest * imports
- igraph >= 1.0.1 imports
- methods * imports
- pkgload * imports
- renv * imports
- stringi * imports
- tools * imports
- utils * imports
- withr * imports
- yaml * imports
- covr * suggests
- ggplot2 * suggests
- knitr * suggests
- rmarkdown * suggests
- terra * suggests
- testthat * suggests
- tibble * suggests
- actions/checkout v2 composite
- actions/setup-python v2 composite
- pat-s/always-upload-cache v3 composite
- r-lib/actions/setup-pandoc v1 composite