oddsratio

Simplified odds ratio calculation of binomial GAM/GLM models

https://github.com/pat-s/oddsratio

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (7.2%) to scientific vocabulary

Keywords

odds-ratio probability statistics

Keywords from Contributors

interpretability parallel mesh yolov5s data-profilers datacleaner pipeline-testing battery animations hack
Last synced: 9 months ago · JSON representation

Repository

Simplified odds ratio calculation of binomial GAM/GLM models

Basic Info
Statistics
  • Stars: 31
  • Watchers: 3
  • Forks: 2
  • Open Issues: 3
  • Releases: 11
Topics
odds-ratio probability statistics
Created over 9 years ago · Last pushed 10 months ago
Metadata Files
Readme Changelog License Codemeta

README.md

MIGRATED to https://github.com/pat-s/oddsratio

oddsratio

tic CRAN status CRAN Downloads lifecycle

Functions for calculation and plotting of odds ratios for Generalized Additive (Mixed) Models and Generalized Linear (Mixed) Models with a binomial response variable (i.e. logistic regression models)

Installation

Install from CRAN:

R install.packages("oddsratio")

Get the development version from Github:

R remotes::install_github("pat-s/oddsratio")

Usage

See the Getting Started vignette.

Owner

  • Name: Patrick Schratz
  • Login: pat-s
  • Kind: user
  • Location: Switzerland
  • Company: devXY GmbH

DevOps, FOSS, #rstats. codefloe.com founder. Public repos migrated to https://codefloe.com/pat-s

CodeMeta (codemeta.json)

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  "description": "Simplified odds ratio calculation of GAM(M)s &\n    GLM(M)s. Provides structured output (data frame) of all predictors and\n    their corresponding odds ratios and confident intervals for further\n    analyses.  It helps to avoid false references of predictors and\n    increments by specifying these parameters in a list instead of using\n    'exp(coef(model))' (standard approach of odds ratio calculation for\n    GLMs) which just returns a plain numeric output.  For GAM(M)s, odds\n    ratio calculation is highly simplified with this package since it\n    takes care of the multiple 'predict()' calls of the chosen predictor\n    while holding other predictors constant. Also, this package allows\n    odds ratio calculation of percentage steps across the whole predictor\n    distribution range for GAM(M)s.  In both cases, confident intervals\n    are returned additionally. Calculated odds ratio of GAM(M)s can be\n    inserted into the smooth function plot.",
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GitHub Events

Total
  • Release event: 1
  • Push event: 299
  • Pull request event: 4
  • Create event: 4
Last Year
  • Release event: 1
  • Push event: 299
  • Pull request event: 4
  • Create event: 4

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 400
  • Total Committers: 3
  • Avg Commits per committer: 133.333
  • Development Distribution Score (DDS): 0.022
Past Year
  • Commits: 8
  • Committers: 2
  • Avg Commits per committer: 4.0
  • Development Distribution Score (DDS): 0.5
Top Committers
Name Email Commits
pat-s p****z@g****m 391
github-actions[bot] 4****] 5
pre-commit-ci[bot] 6****] 4

Issues and Pull Requests

Last synced: 10 months ago

All Time
  • Total issues: 12
  • Total pull requests: 53
  • Average time to close issues: over 1 year
  • Average time to close pull requests: about 1 month
  • Total issue authors: 9
  • Total pull request authors: 2
  • Average comments per issue: 1.17
  • Average comments per pull request: 0.34
  • Merged pull requests: 51
  • Bot issues: 0
  • Bot pull requests: 7
Past Year
  • Issues: 0
  • Pull requests: 3
  • Average time to close issues: N/A
  • Average time to close pull requests: 4 months
  • Issue authors: 0
  • Pull request authors: 2
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 2
  • Bot issues: 0
  • Bot pull requests: 2
Top Authors
Issue Authors
  • pat-s (4)
  • tylerhoecker (1)
  • raff-k (1)
  • rpouillot (1)
  • landge (1)
  • technocrat (1)
  • carolpecaibes (1)
  • rikivillalba (1)
  • YujiroMatsuishi (1)
Pull Request Authors
  • pat-s (48)
  • pre-commit-ci[bot] (10)
Top Labels
Issue Labels
enhancement (2)
Pull Request Labels
CRAN release :station: (2)

Packages

  • Total packages: 1
  • Total downloads:
    • cran 618 last-month
  • Total dependent packages: 1
  • Total dependent repositories: 0
  • Total versions: 9
  • Total maintainers: 1
cran.r-project.org: oddsratio

Odds Ratio Calculation for GAM(M)s & GLM(M)s

  • Versions: 9
  • Dependent Packages: 1
  • Dependent Repositories: 0
  • Downloads: 618 Last month
Rankings
Stargazers count: 9.8%
Downloads: 15.0%
Forks count: 17.8%
Average: 21.6%
Dependent packages count: 29.8%
Dependent repos count: 35.5%
Maintainers (1)
Last synced: 10 months ago

Dependencies

.github/workflows/main.yml actions
  • actions/checkout v3 composite
  • actions/upload-artifact v2 composite
  • pat-s/always-upload-cache v3 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-tinytex v2 composite
.github/workflows/update-tic.yml actions
  • actions/checkout v3 composite
  • peter-evans/create-pull-request v4 composite
  • r-lib/actions/setup-r v2 composite
DESCRIPTION cran
  • R >= 3.0.0 depends
  • ggplot2 >= 3.0.0 imports
  • mgcv * imports
  • stats * imports
  • MASS * suggests
  • gam * suggests
  • knitr * suggests
  • rmarkdown * suggests
  • testthat * suggests