Releases | Open Source Science

What's Changed

AnalysisBlockCyclesPlotOG Revision by @JalenEvans in https://github.com/CIRDLES/Tripoli/pull/292
Forced Parsing Numbers in English Locale by @OscarJGHB in https://github.com/CIRDLES/Tripoli/pull/306
Issue #302 by @JsonHrdwick in https://github.com/CIRDLES/Tripoli/pull/305
[Snyk] Security upgrade github-pages from 229 to 230 by @bowring in https://github.com/CIRDLES/Tripoli/pull/307
formatted code by @bowring in https://github.com/CIRDLES/Tripoli/pull/314
prepping for new mcmc by @bowring in https://github.com/CIRDLES/Tripoli/pull/310
Custom ratio hotfix by @JsonHrdwick in https://github.com/CIRDLES/Tripoli/pull/311
Create link to youtube tutorials by @JsonHrdwick in https://github.com/CIRDLES/Tripoli/pull/312
Remove CE for all but case 1 by @JsonHrdwick in https://github.com/CIRDLES/Tripoli/pull/313
version 0.7.1 by @bowring in https://github.com/CIRDLES/Tripoli/pull/315

New Contributors

@OscarJGHB made their first contribution in https://github.com/CIRDLES/Tripoli/pull/306

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.7.0-beta...v0.7.1-beta

- Java
Published by bowring 7 months ago

tripoli - v0.7.0-beta

Introducing Custom Expressions for processing raw data!

What's Changed

fixed x-bar bug on legend of cycle plots by @bowring in https://github.com/CIRDLES/Tripoli/pull/298
Added GSA talk by @bowring in https://github.com/CIRDLES/Tripoli/pull/299
Custom expression builder by @JsonHrdwick in https://github.com/CIRDLES/Tripoli/pull/295
version 0.7.0 by @bowring in https://github.com/CIRDLES/Tripoli/pull/300

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.6.0-beta...v0.7.0-beta

- Java
Published by bowring 8 months ago

tripoli - v0.6.0-beta

various fixes NEW: Custom report builder - give it a try!

What's Changed

Analysis output test init by @JsonHrdwick in https://github.com/CIRDLES/Tripoli/pull/287
Fixed #293 by @bowring in https://github.com/CIRDLES/Tripoli/pull/294
Report builder by @JsonHrdwick in https://github.com/CIRDLES/Tripoli/pull/291
version 0.6.0 by @bowring in https://github.com/CIRDLES/Tripoli/pull/296

New Contributors

@JsonHrdwick made their first contribution in https://github.com/CIRDLES/Tripoli/pull/287

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.5.9-alpha...v0.6.0-beta

- Java
Published by bowring 10 months ago

tripoli - v0.5.9-alpha

Bug fixes Parameter Manager version 1 by @PowersOfEight Refinement of significant digits display by @JalenEvans

What's Changed

[Snyk] Security upgrade github-pages from 228 to 229 by @bowring in https://github.com/CIRDLES/Tripoli/pull/268
[Snyk] Security upgrade webrick from 1.7.0 to 1.8.2 by @bowring in https://github.com/CIRDLES/Tripoli/pull/269
Settings window by @PowersOfEight in https://github.com/CIRDLES/Tripoli/pull/265
New version with bug fixes and parameter manager by @bowring in https://github.com/CIRDLES/Tripoli/pull/288
countOfTrailingDigits() Bug Fix by @JalenEvans in https://github.com/CIRDLES/Tripoli/pull/286
updated method call by @bowring in https://github.com/CIRDLES/Tripoli/pull/289

New Contributors

@JalenEvans made their first contribution in https://github.com/CIRDLES/Tripoli/pull/286

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.5.8-alpha...v0.5.9-alpha

- Java
Published by bowring about 1 year ago

tripoli - v0.5.8-alpha

A big shout out to @riouxm for putting Tripoli through its paces and supplying interesting data files.

This version fixes some of his issues. Details below.

What's Changed

various fixes by @bowring in https://github.com/CIRDLES/Tripoli/pull/283

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.5.7-alpha...v0.5.8-alpha

- Java
Published by bowring over 1 year ago

What's Changed

Bug fixes by @bowring in https://github.com/CIRDLES/Tripoli/pull/274

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.5.6-alpha...v0.5.7-alpha

- Java
Published by bowring over 1 year ago

tripoli - v0.5.6-alpha

Ahoy! We are back to developing on full steam.

This version 0.5.6 provides solutions to a variety of small issues raised recently in addition to bug fixes and UI improvements. 1. Discussion #261, @YakovYermakov asks to be able to choose data columns before sculpting. After consultation with Noah, the solution is that the plot window will not open the first time a specific Analysis Method is referred to in a data file. As suggested by @ryanickert, the initial default will be all are selected. Subsequently, the plot window will automatically open for any file using that Method. On that first time, the user will select the columns to plot and then save them as the default for that method. They can always be changed and saved later. See image of new tab "Modify." capture 2. Chauvenet's Criterion, discussed at length in various locations is now modified per @noahmclean's suggestions in Discussion #261: ```text Thinking about re-redefining some rules for Chauvenet:

You must have 20+ included points to use Chauvenet. This is because fewer points means a higher risk of rejecting non-outliers. Chauvenet works on the set of all non-rejected data. If data have been rejected previously (e.g., a bad block tossed), then Chauvenet only considers the included data left over after that rejection. This is contrary to our current rules, but is a good change in my opinion. After the Chauvenet rejection, the Chauvenet button grays out and becomes inactive so that you can't recursively apply Chauvenet. After Chauvenet rejection, the user is still able to manually include/exclude data points they like/don't like -- even though they shouldn't. After Chauvenet rejection, the user is able to undo Chauvenet by hitting the 'Restore Data' button. The 'Restore Data' button re-enables the Chauvenet button. Thoughts from the peanut gallery? ``` 3. Discussion #212, Noah raises the issue of hardcoded cycles per block for data files that are missing that info. This version provides for modifying the cycles per block for ANY method. See image above of new tab "Modify." Note the "Reload Data" button that will re-parse the data per the now cycles per block. 4. General announcement - every data file that users have submitted to @noahmclean now opens automatically with drag'n'drop onto Tripoli. If you have files that don't open, please send exemplars to @noahmclean. 5. Issue #264 - addressed here. Make new issue if further refinements needed. 6. Issue #263 - fixed legend. 7. Issue #214 - @noahmclean's solution implemented - ratio will become user function in the presence of included negative or zero values. De-select them and user function returns to being a ratio. v0.5.6

Cheers and please VOTE!

- Java
Published by bowring over 1 year ago

tripoli - v0.5.5-alpha

What's Changed

File and analysis handling by @bowring in https://github.com/CIRDLES/Tripoli/pull/260

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.5.4-alpha...v0.5.5-alpha

- Java
Published by bowring over 1 year ago

tripoli - v0.5.4-alpha

Closes https://github.com/CIRDLES/Tripoli/issues/228 Closes https://github.com/CIRDLES/Tripoli/issues/247 Closes https://github.com/CIRDLES/Tripoli/issues/248 Closes https://github.com/CIRDLES/Tripoli/issues/249 Closes https://github.com/CIRDLES/Tripoli/issues/250 Closes https://github.com/CIRDLES/Tripoli/issues/251

What's Changed

Various issues by @bowring in https://github.com/CIRDLES/Tripoli/pull/253

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.5.3-alpha...v0.5.4-alpha

- Java
Published by bowring almost 2 years ago

tripoli - v0.5.3-alpha

What's Changed

Various issues plus first pass at Neptune data by @bowring in https://github.com/CIRDLES/Tripoli/pull/244

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.5.2-alpha...v0.5.3-alpha

- Java
Published by bowring almost 2 years ago

tripoli - v0.5.2-alpha

Various fixes. Thanks to all who contributed issues!

What's Changed

Fixed #235 and related by @bowring in https://github.com/CIRDLES/Tripoli/pull/237
15may2024 by @bowring in https://github.com/CIRDLES/Tripoli/pull/238

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.5.1-alpha...v0.5.2-alpha

- Java
Published by bowring almost 2 years ago

tripoli - v0.5.1-alpha

Still Buggy

What's Changed

Trial ETRedux export by @bowring in https://github.com/CIRDLES/Tripoli/pull/232
export bug by @bowring in https://github.com/CIRDLES/Tripoli/pull/233

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.5.0-alpha...v0.5.1-alpha

- Java
Published by bowring almost 2 years ago

tripoli - v0.5.0-alpha

Release early and often - progress.

What's Changed

Updated web page for 2024 workshops by @bowring in https://github.com/CIRDLES/Tripoli/pull/224
Fixed pages by @bowring in https://github.com/CIRDLES/Tripoli/pull/225
mo fixes by @bowring in https://github.com/CIRDLES/Tripoli/pull/226
Progress by @bowring in https://github.com/CIRDLES/Tripoli/pull/230

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.4.9-alpha...v0.5.0-alpha

- Java
Published by bowring almost 2 years ago

tripoli - v0.4.9-alpha

What's Changed

Chauvenet and various refinements. by @bowring in https://github.com/CIRDLES/Tripoli/pull/222

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.4.8-alpha...v0.4.9-alpha

- Java
Published by bowring almost 2 years ago

tripoli - v0.4.8-alpha

Completes phase I of OGTripoli functionality: you can drag-n-drop files onto the GUI; toggle inclusion of blocks and cycles, etc.

Yet todo: Chauvenet automated rejection and output to ET_Redux and generic formats.

What's Changed

Completion of OGTripoli Phase I by @bowring in https://github.com/CIRDLES/Tripoli/pull/220

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.4.7-alpha...v0.4.8-alpha

- Java
Published by bowring almost 2 years ago

tripoli - v0.4.7-alpha

Added IonVantage files to OGTripoli feature

What's Changed

Added IonVantage files and refactored by @bowring in https://github.com/CIRDLES/Tripoli/pull/215

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.4.6-alpha...v0.4.7-alpha

- Java
Published by bowring almost 2 years ago

tripoli - v0.4.6-alpha

Modifies rounding of stats in cycle mode of OGTripoli plots per: https://docs.google.com/document/d/14PPEDEJPylNMavpJDpYSuemNb0gF5dzTo3Ek1YAgw/edit?usp=sharing

What's Changed

Updated rounding of cycle mode stats for OGTripoli per Noah by @bowring in https://github.com/CIRDLES/Tripoli/pull/210
fixed version number by @bowring in https://github.com/CIRDLES/Tripoli/pull/211

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.4.5-alpha...v0.4.6-alpha

- Java
Published by bowring almost 2 years ago

tripoli - v0.4.5-alpha

To use OGTripoli mode, simply make a new analysis and load your file. OGTripoli mode opens these files: Phoenix ".TIMSDP" Triton ".exp" NU: (Individual Answers) ".txt"

Check me out!

Please join the discussion.

What's Changed

Progress commit by @bowring in https://github.com/CIRDLES/Tripoli/pull/207
OGTripoli plots for review by @bowring in https://github.com/CIRDLES/Tripoli/pull/208

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.4.4-alpha...v0.4.5-alpha

- Java
Published by bowring almost 2 years ago

tripoli - v0.4.4-alpha

Partial implementation of OGTripoli functionality for IsolinxVersion2 TIMSDP files and Triton exp file. Try it and if your files won't open, make an issue including an example file. See our notes in progress.

What's Changed

OGTripoli Plotting by @bowring in https://github.com/CIRDLES/Tripoli/pull/203
Refining plots for OGTripoli case1 (original) by @bowring in https://github.com/CIRDLES/Tripoli/pull/205

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.4.3-alpha...v0.4.4-alpha

- Java
Published by bowring about 2 years ago

tripoli - v0.4.3-alpha

What's Changed

Updated cycles and refactored by @bowring in https://github.com/CIRDLES/Tripoli/pull/200

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.4.2-alpha...v0.4.3-alpha

- Java
Published by bowring about 2 years ago

tripoli - v0.4.2-alpha

What's Changed

Added reporting of vectors per issue #196; various GUI improvements; by @bowring in https://github.com/CIRDLES/Tripoli/pull/197

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.4.1-alpha...v0.4.2-alpha

- Java
Published by bowring about 2 years ago

tripoli - v0.4.1-alpha

What's Changed

Changed plotting of Dsig uncertainty to center on zero. by @bowring in https://github.com/CIRDLES/Tripoli/pull/194

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.4.0-alpha...v0.4.1-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.4.0-alpha

What's Changed

Added plot of intensity residuals and reader for TIMSDP data. by @bowring in https://github.com/CIRDLES/Tripoli/pull/192

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.3.9-alpha...v0.4.0-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.3.9-alpha

What's Changed

Fixed model plot on intensities to be constrained to faraday or PM by @bowring in https://github.com/CIRDLES/Tripoli/pull/189
JUnit Test by @mynguy in https://github.com/CIRDLES/Tripoli/pull/166
Changed reportInterval to 0.1 hardcoded temporarily, and refactored by @bowring in https://github.com/CIRDLES/Tripoli/pull/190

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.3.8-alpha...v0.3.9-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.3.8-alpha

What's Changed

Weighted Means and various improvements by @bowring in https://github.com/CIRDLES/Tripoli/pull/187

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.3.7-alpha...v0.3.8-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.3.7-alpha

With @noahmclean inspiration, the Species Intensity Plot works like this:

There are two modes: Selection and Sculpting

Both allow any number of species to be shown Both use scroll-zoom and RIGHT mouse pressed panning Both allow block include/exclude with SHIFT + LEFT mouse click on block or block title

Selection: LEFT mouse draws a zoomBox that upon completion zooms in and can be repeated. Selection: to ENTER Sculpting mode, LEFT mouse double-click Selection: LEFT mouse double click on block name (at top) zooms into that block and enters Sculpting mode

Sculpting: LEFT mouse draws a selection box to toggle intensities as included / excluded (RED = excluded) Sculpting: to EXIT Sculpting mode, LEFT mouse double-click

Excluded intensities are ignored in the log ratio calculations as shown in the Ensembles.

What's Changed

SpciesIntensityPlot by @bowring in https://github.com/CIRDLES/Tripoli/pull/183

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.3.6-alpha...v0.3.7-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.3.6-alpha

What's Changed

Added MCMC tutorial by @bowring in https://github.com/CIRDLES/Tripoli/pull/171
Fixes Issues #173, #174, #175, #176 by @bowring in https://github.com/CIRDLES/Tripoli/pull/179
[Snyk] Security upgrade github-pages from 226 to 227 by @bowring in https://github.com/CIRDLES/Tripoli/pull/154
Color plot by @PowersOfEight in https://github.com/CIRDLES/Tripoli/pull/172
Improvements to SpeciesIntensities plot by @bowring in https://github.com/CIRDLES/Tripoli/pull/181

New Contributors

@PowersOfEight made their first contribution in https://github.com/CIRDLES/Tripoli/pull/172

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.3.5-alpha...v0.3.6-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.3.5-alpha

What's Changed

Various improvements by @bowring in https://github.com/CIRDLES/Tripoli/pull/169

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.3.4-alpha...v0.3.5-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.3.4-alpha

What's Changed

Refined plotting and added simple reporting by @bowring in https://github.com/CIRDLES/Tripoli/pull/167

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.3.3-alpha...v0.3.4-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.3.3-alpha

What's Changed

Updated peak centre plotting by @bowring in https://github.com/CIRDLES/Tripoli/pull/163
Add junit tests by @mynguy in https://github.com/CIRDLES/Tripoli/pull/160
Revert "Add junit tests" by @bowring in https://github.com/CIRDLES/Tripoli/pull/164
minor tweaks by @bowring in https://github.com/CIRDLES/Tripoli/pull/165

New Contributors

@mynguy made their first contribution in https://github.com/CIRDLES/Tripoli/pull/160

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.3.2-alpha...v0.3.3-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.3.2-alpha

What's Changed

tidbits from Detroit PI meeting by @bowring in https://github.com/CIRDLES/Tripoli/pull/138
Detroit2 by @bowring in https://github.com/CIRDLES/Tripoli/pull/139
Logratio by @bowring in https://github.com/CIRDLES/Tripoli/pull/140
Hist2 by @bowring in https://github.com/CIRDLES/Tripoli/pull/141
Update Init by @bowring in https://github.com/CIRDLES/Tripoli/pull/142
Phase I of OGTripoli review plots by @bowring in https://github.com/CIRDLES/Tripoli/pull/143
Added interactive features to OGTripoli session plot by @bowring in https://github.com/CIRDLES/Tripoli/pull/145
OGTripoli views of raw data and processed data by @bowring in https://github.com/CIRDLES/Tripoli/pull/148
Refinements and bug fixes by @bowring in https://github.com/CIRDLES/Tripoli/pull/150
updated website by @bowring in https://github.com/CIRDLES/Tripoli/pull/152
added weblink by @bowring in https://github.com/CIRDLES/Tripoli/pull/153
[Snyk] Security upgrade github-pages from 225 to 226 by @bowring in https://github.com/CIRDLES/Tripoli/pull/147
Handles v1 of synthetic data 5 isotope by @bowring in https://github.com/CIRDLES/Tripoli/pull/155
Bug fix and refactoring by @bowring in https://github.com/CIRDLES/Tripoli/pull/157
Interactive converge and various improvements to plots. by @bowring in https://github.com/CIRDLES/Tripoli/pull/161

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.2.1...V0.3.2

- Java
Published by bowring over 2 years ago

tripoli - v0.3.1-alpha

What's Changed

Burnin on plotting is 10% of ensembles

Bug fix and refactoring by @bowring in https://github.com/CIRDLES/Tripoli/pull/157

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.3.0-alpha...v0.3.1-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.3.0-alpha

What's Changed

updated website by @bowring in https://github.com/CIRDLES/Tripoli/pull/152
added weblink by @bowring in https://github.com/CIRDLES/Tripoli/pull/153
[Snyk] Security upgrade github-pages from 225 to 226 by @bowring in https://github.com/CIRDLES/Tripoli/pull/147

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.2.9-alpha...v0.3.0-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.2.9-alpha

What's Changed

OGTripoli views of raw data and processed data by @bowring in https://github.com/CIRDLES/Tripoli/pull/148

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.2.7-alpha...v0.2.9-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.2.8-alpha

What's Changed

Added interactive features to OGTripoli session plot by @bowring in https://github.com/CIRDLES/Tripoli/pull/145

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.2.6-alpha...v0.2.8-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.2.7-alpha

What's Changed

Added interactive features to OGTripoli session plot by @bowring in https://github.com/CIRDLES/Tripoli/pull/145

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.2.6-alpha...v0.2.7-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.2.6-alpha

What's Changed

Hist2 by @bowring in https://github.com/CIRDLES/Tripoli/pull/141
Update Init by @bowring in https://github.com/CIRDLES/Tripoli/pull/142

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.2.4-alpha...v0.2.6-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.2.5-alpha

What's Changed

Hist2 by @bowring in https://github.com/CIRDLES/Tripoli/pull/141
Update Init by @bowring in https://github.com/CIRDLES/Tripoli/pull/142

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.2.4-alpha...v0.2.5-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.2.4-alpha

What's Changed

Logratio by @bowring in https://github.com/CIRDLES/Tripoli/pull/140

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.2.3-alpha...v0.2.4-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.2.3-alpha

What's Changed

NOTE: the ensembles are automatically written per block as "EnsemblesForBlock_n.csv". Every run over-writes these files.

tidbits from Detroit PI meeting by @bowring in https://github.com/CIRDLES/Tripoli/pull/138

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.2.1...v0.2.3-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.2.2-alpha

What's Changed

Tweaks by @bowring in https://github.com/CIRDLES/Tripoli/pull/135

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.2.0...v.0.2.2-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.2.1-alpha

What's Changed

Tweaks by @bowring in https://github.com/CIRDLES/Tripoli/pull/135

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.2.0...v0.2.1

- Java
Published by bowring over 2 years ago

tripoli - v0.2.0-alpha

What's Changed

Added ratio flipper to ratio selector by @bowring in https://github.com/CIRDLES/Tripoli/pull/132
Ported new init algorithm from @sbordyak matlab code.

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.1.9-alpha...v0.2.0

- Java
Published by bowring over 2 years ago

tripoli - v0.1.9-alpha

What's Changed

Peak Shape Single-Block by @robinsonianr in https://github.com/CIRDLES/Tripoli/pull/120
Tunepeaks by @bowring in https://github.com/CIRDLES/Tripoli/pull/128
New Ratios chooser by @bowring in https://github.com/CIRDLES/Tripoli/pull/129

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.1.8-alpha...v0.1.9-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.1.8-alpha

What's Changed

PeakShapes Refactoring by @robinsonianr in https://github.com/CIRDLES/Tripoli/pull/115
Fixed baseline plotting bug by @bowring in https://github.com/CIRDLES/Tripoli/pull/122
[Snyk] Security upgrade github-pages from 225 to 225 by @snyk-bot in https://github.com/CIRDLES/Tripoli/pull/121
Updated dependencies by @bowring in https://github.com/CIRDLES/Tripoli/pull/124
restored logratios to original plan by @bowring in https://github.com/CIRDLES/Tripoli/pull/125
Convergence test added by @bowring in https://github.com/CIRDLES/Tripoli/pull/126

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.1.7-alpha...v0.1.8-alpha

- Java
Published by bowring over 2 years ago

tripoli - v0.1.7-alpha

What's Changed

[Snyk] Security upgrade github-pages from 225 to 225 by @bowring in https://github.com/CIRDLES/Tripoli/pull/101
[Snyk] Security upgrade github-pages from 225 to 225 by @bowring in https://github.com/CIRDLES/Tripoli/pull/111
Mcmc2 by @bowring in https://github.com/CIRDLES/Tripoli/pull/118

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.1.6-alpha...v0.1.7-alpha

- Java
Published by bowring almost 3 years ago

tripoli - v0.1.6-alpha

What's Changed

Added invertable ratio histograms by @bowring in https://github.com/CIRDLES/Tripoli/pull/116

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.1.5-alpha...v0.1.6-alpha

- Java
Published by bowring almost 3 years ago

tripoli - v0.1.5-alpha

What's Changed

Completed MRU for files by @bowring in https://github.com/CIRDLES/Tripoli/pull/113

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.1.4-alpha...v0.1.5-alpha

- Java
Published by bowring almost 3 years ago

tripoli - v0.1.4-alpha

What's Changed

Fixed #105 by @bowring in https://github.com/CIRDLES/Tripoli/pull/106
Testing by @neil-coffey in https://github.com/CIRDLES/Tripoli/pull/107
Plotting tweaks by @bowring in https://github.com/CIRDLES/Tripoli/pull/108
PeakShapes ToolTip by @robinsonianr in https://github.com/CIRDLES/Tripoli/pull/74
Added ratio chooser for plotting by @bowring in https://github.com/CIRDLES/Tripoli/pull/109

New Contributors

@neil-coffey made their first contribution in https://github.com/CIRDLES/Tripoli/pull/107

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.1.3-alpha...v0.1.4-alpha

- Java
Published by bowring almost 3 years ago

tripoli - v0.1.3-alpha

What's Changed

Added data plot colored by sequence by @bowring in https://github.com/CIRDLES/Tripoli/pull/99
Added control of block processing and session view of ratios by @bowring in https://github.com/CIRDLES/Tripoli/pull/102
Tweaked model max by @bowring in https://github.com/CIRDLES/Tripoli/pull/103

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.1.1-alpha...v0.1.3-alpha

- Java
Published by bowring almost 3 years ago

tripoli - v0.1.2-alpha

What's Changed

Refined Plotting by @bowring in https://github.com/CIRDLES/Tripoli/pull/97

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.1.0-alpha...v0.1.2-alpha

- Java
Published by bowring almost 3 years ago

tripoli - v0.1.1-alpha

What's Changed

Refined Plotting by @bowring in https://github.com/CIRDLES/Tripoli/pull/97

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.1.0-alpha...v0.1.1-alpha

- Java
Published by bowring almost 3 years ago

tripoli - v0.1.0-alpha

What's Changed

Implemented MCMC adaptation algorithmI by @bowring in https://github.com/CIRDLES/Tripoli/pull/95
sessions can be saved as .tripoli files

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.0.9-alpha...v0.1.0-alpha

- Java
Published by bowring about 3 years ago

tripoli - v0.0.9-alpha

What's Changed

Testing travis integration by @bowring in https://github.com/CIRDLES/Tripoli/pull/93
Tweaks to data processing by @bowring in https://github.com/CIRDLES/Tripoli/pull/94

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.0.8-alpha...v0.0.9-alpha

- Java
Published by bowring about 3 years ago

tripoli - v0.0.8-alpha

Please see discussion for this release. Note: for a new analysis, choose the data ".txt" file found in the Phoenix folder structure inside the ".RAW" folder. The specified method will be loaded if it exists in the Methods folder, otherwise you can select it.

Tripoli allows you to process one block at a time, though you can fire up multiple copies of the Monte Carlo interface to look at blocks side by side with the red-letter button on the analysis manager.

This is all a work in progress and we are exploring ways to build the GUI, so comments are welcome, including sketches.

What's Changed

Delx adapt Simplification by @RoyalBoggs in https://github.com/CIRDLES/Tripoli/pull/80
[Snyk] Security upgrade github-pages from 225 to 225 by @bowring in https://github.com/CIRDLES/Tripoli/pull/81
Removed n/n logratio of zero from matrices by @bowring in https://github.com/CIRDLES/Tripoli/pull/82
28oct22 by @bowring in https://github.com/CIRDLES/Tripoli/pull/83
1nov22 by @bowring in https://github.com/CIRDLES/Tripoli/pull/86
Update Delx Adapt by @RoyalBoggs in https://github.com/CIRDLES/Tripoli/pull/85
Advanced architecture and refactored by @bowring in https://github.com/CIRDLES/Tripoli/pull/88
Advanced GUI and refactored by @bowring in https://github.com/CIRDLES/Tripoli/pull/89
GUI supports loading text file and method for Phoenix by @bowring in https://github.com/CIRDLES/Tripoli/pull/90
Adjusted allBlockInterpolations by @RoyalBoggs in https://github.com/CIRDLES/Tripoli/pull/84
Improved GUI and Monte Carlo by @bowring in https://github.com/CIRDLES/Tripoli/pull/91

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.0.7-alpha...v0.0.8-alpha

- Java
Published by bowring about 3 years ago

tripoli - v0.0.7-alpha

What's Changed

Adds demo of new plotting capabilities for review by @bowring in https://github.com/CIRDLES/Tripoli/pull/78
Delx adapt by @RoyalBoggs in https://github.com/CIRDLES/Tripoli/pull/75

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.0.6-alpha...v0.0.7-alpha

- Java
Published by bowring over 3 years ago

tripoli - v0.0.6-alpha

What's Changed

started to handle multiple blocks by @bowring in https://github.com/CIRDLES/Tripoli/pull/67
Speed up by @RoyalBoggs in https://github.com/CIRDLES/Tripoli/pull/68
Refactored by @bowring in https://github.com/CIRDLES/Tripoli/pull/69
Plotting progress for 5-isotopes by @bowring in https://github.com/CIRDLES/Tripoli/pull/71
Peak Refining and Doc by @robinsonianr in https://github.com/CIRDLES/Tripoli/pull/70
new release by @bowring in https://github.com/CIRDLES/Tripoli/pull/72

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.0.5-alpha...v0.0.6-alpha

- Java
Published by bowring over 3 years ago

tripoli - v0.0.5-alpha

Try out the demos!

What's Changed

Speedup by @bowring in https://github.com/CIRDLES/Tripoli/pull/46
Refactored by @bowring in https://github.com/CIRDLES/Tripoli/pull/48
Augdocs by @bowring in https://github.com/CIRDLES/Tripoli/pull/49
[Snyk] Fix for 5 vulnerabilities by @snyk-bot in https://github.com/CIRDLES/Tripoli/pull/47
Ojalgo and Matlab PeakShapes by @robinsonianr in https://github.com/CIRDLES/Tripoli/pull/45
Refactored by @bowring in https://github.com/CIRDLES/Tripoli/pull/50
Refactored and Cleanup by @robinsonianr in https://github.com/CIRDLES/Tripoli/pull/51
Added Compositional Data tutorial by @bowring in https://github.com/CIRDLES/Tripoli/pull/52
PeakShapes by @robinsonianr in https://github.com/CIRDLES/Tripoli/pull/53
Refactoring by @bowring in https://github.com/CIRDLES/Tripoli/pull/54
Resources fix by @robinsonianr in https://github.com/CIRDLES/Tripoli/pull/55
Advanced plotting of MCMC Ensemble data by @bowring in https://github.com/CIRDLES/Tripoli/pull/58
Advancing the MCMC plots and refactoring by @bowring in https://github.com/CIRDLES/Tripoli/pull/59
Ojalgo by @RoyalBoggs in https://github.com/CIRDLES/Tripoli/pull/57
Additional plots and conversion to ojAlgo matrix library by @bowring in https://github.com/CIRDLES/Tripoli/pull/60
Complete plots for MCMC by @bowring in https://github.com/CIRDLES/Tripoli/pull/61
refined log plots by @bowring in https://github.com/CIRDLES/Tripoli/pull/63
Minor Optimizations by @RoyalBoggs in https://github.com/CIRDLES/Tripoli/pull/62
tidied up plots and labels by @bowring in https://github.com/CIRDLES/Tripoli/pull/64
Finished phaseI or 2 isotope synthetic RJMCMC and plots by @bowring in https://github.com/CIRDLES/Tripoli/pull/65
PeakShapes Resources by @robinsonianr in https://github.com/CIRDLES/Tripoli/pull/56

New Contributors

@snyk-bot made their first contribution in https://github.com/CIRDLES/Tripoli/pull/47
@RoyalBoggs made their first contribution in https://github.com/CIRDLES/Tripoli/pull/57

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.0.4-alpha...v0.0.5-alpha

- Java
Published by bowring over 3 years ago

tripoli - v0.0.4-alpha

What's Changed

Refactoring and porting of PeakShapes demo by @bowring in https://github.com/CIRDLES/Tripoli/pull/42

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v.0.0.3-alpha...v0.0.4-alpha

- Java
Published by bowring over 3 years ago

tripoli - v.0.0.3-alpha

Hi folks - We have added a bare-bones port of @sbordyak's MatLab code for MCMC for the the two-isotope case (206Pb, 208Pb) that processes a built-in synthetic data file and produces a histogram of the ratios generated by the models. This is purely a proof-of-concept and a jumping-off point for a more robust treatment. To use it click on the Demos menu item to the right of help.

Enjoy!

Also, please welcome @robinsonianr , a student at College of Charleston now working with CIRDLES and contributing to this and future releases!

What's Changed

23apr22 by @bowring in https://github.com/CIRDLES/Tripoli/pull/28
Updated gradle build by @robinsonianr in https://github.com/CIRDLES/Tripoli/pull/27
Workshops by @bowring in https://github.com/CIRDLES/Tripoli/pull/29
Updated workshops page by @bowring in https://github.com/CIRDLES/Tripoli/pull/30
Workshop by @bowring in https://github.com/CIRDLES/Tripoli/pull/31
Edits to workshop announcement by @noahmclean in https://github.com/CIRDLES/Tripoli/pull/32
Commented and reformatted gradle by @robinsonianr in https://github.com/CIRDLES/Tripoli/pull/33
Updated logo and website by @bowring in https://github.com/CIRDLES/Tripoli/pull/35
Progress in matlab code port by @bowring in https://github.com/CIRDLES/Tripoli/pull/38
Advanced port of matlab code by @bowring in https://github.com/CIRDLES/Tripoli/pull/39

New Contributors

@robinsonianr made their first contribution in https://github.com/CIRDLES/Tripoli/pull/27
@noahmclean made their first contribution in https://github.com/CIRDLES/Tripoli/pull/32

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.0.2-alpha...v.0.0.3-alpha

- Java
Published by bowring over 3 years ago

tripoli - v0.0.2-alpha

What's Changed

Refactored architecture by @bowring in https://github.com/CIRDLES/Tripoli/pull/24
cleaned files by @bowring in https://github.com/CIRDLES/Tripoli/pull/25
Refactoring by @bowring in https://github.com/CIRDLES/Tripoli/pull/26

Full Changelog: https://github.com/CIRDLES/Tripoli/compare/v0.0.1-alpha...v0.0.2-alpha

- Java
Published by bowring almost 4 years ago

tripoli - v0.0.1-alpha

What's Changed

Added missing resource by @bowring in https://github.com/CIRDLES/Tripoli/pull/1
Website init by @bowring in https://github.com/CIRDLES/Tripoli/pull/2
Updated headers by @bowring in https://github.com/CIRDLES/Tripoli/pull/3
Additional structure by @bowring in https://github.com/CIRDLES/Tripoli/pull/4
Refactoring project architecture by @bowring in https://github.com/CIRDLES/Tripoli/pull/5
Updated Resources by @bowring in https://github.com/CIRDLES/Tripoli/pull/10
Started work on serializers, matrices, models. Added Isotopx files. by @bowring in https://github.com/CIRDLES/Tripoli/pull/11
Updated web pages by @bowring in https://github.com/CIRDLES/Tripoli/pull/12
Added missing files by @bowring in https://github.com/CIRDLES/Tripoli/pull/13
Updated webpages by @bowring in https://github.com/CIRDLES/Tripoli/pull/14
fixed urls by @bowring in https://github.com/CIRDLES/Tripoli/pull/15
Updated web pages by @bowring in https://github.com/CIRDLES/Tripoli/pull/18
Added oversight board menu item by @bowring in https://github.com/CIRDLES/Tripoli/pull/19
Architectural Outline phase I by @bowring in https://github.com/CIRDLES/Tripoli/pull/20
testweb by @bowring in https://github.com/CIRDLES/Tripoli/pull/21
Added periodic table and refactored by @bowring in https://github.com/CIRDLES/Tripoli/pull/22

New Contributors

@bowring made their first contribution in https://github.com/CIRDLES/Tripoli/pull/1

Full Changelog: https://github.com/CIRDLES/Tripoli/commits/v0.0.1

- Java
Published by bowring almost 4 years ago

Recent Releases of tripoli

tripoli - v0.7.1-beta

What's Changed

New Contributors

tripoli - v0.7.0-beta

What's Changed

tripoli - v0.6.0-beta

What's Changed

New Contributors

tripoli - v0.5.9-alpha

What's Changed

New Contributors

tripoli - v0.5.8-alpha

What's Changed

tripoli - v0.5.7-alpha

What's Changed

tripoli - v0.5.6-alpha

tripoli - v0.5.5-alpha

What's Changed

tripoli - v0.5.4-alpha

What's Changed

tripoli - v0.5.3-alpha

What's Changed

tripoli - v0.5.2-alpha

What's Changed

tripoli - v0.5.1-alpha

What's Changed

tripoli - v0.5.0-alpha

What's Changed

tripoli - v0.4.9-alpha

What's Changed

tripoli - v0.4.8-alpha

What's Changed

tripoli - v0.4.7-alpha

What's Changed

tripoli - v0.4.6-alpha

What's Changed

tripoli - v0.4.5-alpha

What's Changed

tripoli - v0.4.4-alpha

What's Changed

tripoli - v0.4.3-alpha

What's Changed

tripoli - v0.4.2-alpha

What's Changed

tripoli - v0.4.1-alpha

What's Changed

tripoli - v0.4.0-alpha

What's Changed

tripoli - v0.3.9-alpha

What's Changed

tripoli - v0.3.8-alpha

What's Changed

tripoli - v0.3.7-alpha

What's Changed

tripoli - v0.3.6-alpha

What's Changed

New Contributors

tripoli - v0.3.5-alpha

What's Changed

tripoli - v0.3.4-alpha

What's Changed

tripoli - v0.3.3-alpha

What's Changed

New Contributors

tripoli - v0.3.2-alpha

What's Changed

tripoli - v0.3.1-alpha

What's Changed

tripoli - v0.3.0-alpha

What's Changed

tripoli - v0.2.9-alpha

What's Changed

tripoli - v0.2.8-alpha

What's Changed

tripoli - v0.2.7-alpha

What's Changed

tripoli - v0.2.6-alpha

What's Changed

tripoli - v0.2.5-alpha