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Recent Releases of cytodataframe

cytodataframe - v0.0.24

Changes

  • Enable terminal-based display of CytoDataFrames (@d33bs via #108)

- Python
Published by github-actions[bot] about 1 year ago

cytodataframe - v0.0.23

Changes

  • Add "image adjustment" slider for dynamic image adjustments within Jupyter environments (@d33bs via #104)

- Python
Published by github-actions[bot] about 1 year ago

cytodataframe - v0.0.22

Changes

  • Fix chained method calls and add integration test with cosmicqc (@d33bs via #99)

- Python
Published by github-actions[bot] about 1 year ago

cytodataframe - v0.0.21

Changes

  • Add display_options for dynamic width and height of images; enable transpose (@d33bs via #95)
  • Add red dot capability for visualizing the center of compartments (@d33bs via #93)
  • Bump the python-packages group with 3 updates (@dependabot[bot] via #89)
  • Bump h11 from 0.14.0 to 0.16.0 (@dependabot[bot] via #87)
  • Bump duckdb from 1.2.1 to 1.2.2 in the python-packages group (@dependabot[bot] via #86)
  • Bump the python-packages group with 2 updates (@dependabot[bot] via #85)
  • Bump the python-packages group across 1 directory with 4 updates (@dependabot[bot] via #84)
  • Bump jinja2 from 3.1.5 to 3.1.6 (@dependabot[bot] via #82)
  • Bump the python-packages group with 8 updates (@dependabot[bot] via #81)

- Python
Published by github-actions[bot] about 1 year ago

cytodataframe - v0.0.20

Changes

  • Require dynamic versioning backend build-system (@d33bs via #80)

- Python
Published by github-actions[bot] over 1 year ago

cytodataframe - v0.0.19

Changes

  • Add sample wrapper (@jenna-tomkinson via #79)

- Python
Published by github-actions[bot] over 1 year ago

cytodataframe - v0.0.18

Changes

  • Wrap head and tail results as CytoDataFrame (@d33bs via #76)
  • Bump macos gh actions runner version (@d33bs via #71)
  • Update dependabot to group Python updates together (@d33bs via #73)
  • Fix dynamic versioning substitution and plugin requirement (@d33bs via #74)
  • Add software DOI to repository (@d33bs via #72)

- Python
Published by github-actions[bot] over 1 year ago

cytodataframe - v0.0.17

Changes

- Python
Published by github-actions[bot] over 1 year ago

cytodataframe - v0.0.16

Changes

  • Enable Image_PathName_ columns to be used for building image file references (@d33bs via #61)
  • Bump jinja2 from 3.1.4 to 3.1.5 (@dependabot via #59)
  • Bump coverage from 7.6.9 to 7.6.10 (@dependabot via #58)
  • Bump imagecodecs from 2024.9.22 to 2024.12.30 (@dependabot via #57)
  • Bump pydata-sphinx-theme from 0.16.0 to 0.16.1 (@dependabot via #55)
  • Bump jupyterlab from 4.3.3 to 4.3.4 (@dependabot via #56)
  • Bump jupytext from 1.16.5 to 1.16.6 (@dependabot via #54)

- Python
Published by github-actions[bot] over 1 year ago

cytodataframe - v0.0.15

Changes

  • Add matplotlib as production dependency; remove plotly (@d33bs via #49)
  • Bump jupyterlab from 4.3.2 to 4.3.3 (@dependabot via #52)
  • Bump matplotlib from 3.9.3 to 3.9.4 (@dependabot via #51)
  • Bump jupytext from 1.16.4 to 1.16.5 (@dependabot via #50)

- Python
Published by github-actions[bot] over 1 year ago

cytodataframe - v0.0.14

Changes

  • Enable adaptive image display adjustments and "bring your own image processor" capabilities (@d33bs via #45)
  • Add pre-commit CI lite for automated fixes (@d33bs via #29)
  • Bump coverage from 7.6.8 to 7.6.9 (@dependabot via #47)
  • Bump jupyterlab from 4.3.1 to 4.3.2 (@dependabot via #46)
  • Bump pytest from 8.3.3 to 8.3.4 (@dependabot via #44)
  • Bump pyarrow from 18.0.0 to 18.1.0 (@dependabot via #43)
  • Bump coverage from 7.6.7 to 7.6.8 (@dependabot via #42)
  • Bump tornado from 6.4.1 to 6.4.2 (@dependabot via #41)
  • Bump jupyterlab from 4.3.0 to 4.3.1 (@dependabot via #36)
  • Bump coverage from 7.6.4 to 7.6.7 (@dependabot via #37)
  • Bump dunamai from 1.22.0 to 1.23.0 (@dependabot via #38)
  • Read outlines or masks from segmentation_file_regex parameter (@d33bs via #25)
  • Bump pyarrow from 16.1.0 to 18.0.0 (@dependabot via #23)

- Python
Published by github-actions[bot] over 1 year ago

cytodataframe - v0.0.13

Changes

  • Remove show_report capabilities and cosmicqc dependency (@d33bs via #21)

- Python
Published by github-actions[bot] over 1 year ago

cytodataframe - v0.0.12

Changes

  • Add JUMP image data compatibility and example notebook (@d33bs via #18)
  • Bump ipython from 8.12.3 to 8.18.1 (@dependabot via #17)
  • Bump coverage from 7.6.0 to 7.6.4 (@dependabot via #16)
  • Remove unnecessary docs steps which cause bugs during docs build (@d33bs via #14)

- Python
Published by github-actions[bot] over 1 year ago

cytodataframe - v0.0.11

Note: we tag this version as v0.0.11 as it reflects the relevant version from coSMicQC, from which CytoDataFrame development originated.

Changes

  • Bump pytest from 8.2.1 to 8.3.3 (@dependabot via #13)
  • Bump myst-nb from 1.1.1 to 1.1.2 (@dependabot via #12)
  • Bump plotly from 5.22.0 to 5.24.1 (@dependabot via #11)
  • Bump sqlalchemy from 1.4.54 to 2.0.36 (@dependabot via #10)
  • Bump html2image from 2.0.4.3 to 2.0.5 (@dependabot via #9)
  • Enable Dependabot updates to Poetry, fix tests and docs build (@d33bs via #6)
  • Migrate CytoDataFrame from coSMicQC as standalone package (@d33bs via #4)

- Python
Published by github-actions[bot] over 1 year ago