FedData

Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources

https://github.com/ropensci/feddata

Science Score: 59.0%

This score indicates how likely this project is to be science-related based on various indicators:

○
CITATION.cff file
✓
codemeta.json file
Found codemeta.json file
✓
.zenodo.json file
Found .zenodo.json file
✓
DOI references
Found 3 DOI reference(s) in README
✓
Academic publication links
Links to: zenodo.org
✓
Committers with academic emails
1 of 10 committers (10.0%) from academic institutions
○
Institutional organization owner
○
JOSS paper metadata
○
Scientific vocabulary similarity
Low similarity (15.2%) to scientific vocabulary

Keywords

peer-reviewed r r-package rstats

Keywords from Contributors

reproducibility climate genome stable open-educational-resources lesson english ecology data-wrangling data-carpentry

Last synced: 6 months ago · JSON representation

Repository

Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources

Basic Info

Host: GitHub
Owner: ropensci
License: other
Language: R
Default Branch: main
Homepage: https://docs.ropensci.org/FedData
Size: 405 MB

Statistics

Stars: 103
Watchers: 7
Forks: 22
Open Issues: 3
Releases: 15

Topics

peer-reviewed r r-package rstats

Created over 11 years ago · Last pushed 11 months ago

Metadata Files

Readme Changelog License Codemeta

README.Rmd

---
output: github_document
editor_options: 
  chunk_output_type: console
---



```{r setup, include = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/README-",
  out.width = "100%",
  dpi = 72
)
```

[![Project Status: Active – The project has reached a stable, usable state and is being actively developed.](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active)
[![CRAN version](https://www.r-pkg.org/badges/version/FedData)](https://cran.r-project.org/package=FedData)
[![CRAN downloads per month](https://cranlogs.r-pkg.org/badges/FedData)](https://github.com/r-hub/cranlogs.app)
[![CRAN downloads](https://cranlogs.r-pkg.org/badges/grand-total/FedData)](https://github.com/r-hub/cranlogs.app)
[![R-CMD-check](https://github.com/ropensci/FedData/actions/workflows/check-standard.yaml/badge.svg)](https://github.com/ropensci/FedData/actions/workflows/check-standard.yaml)
[![Codecov test coverage](https://codecov.io/gh/ropensci/FedData/branch/master/graph/badge.svg)](https://app.codecov.io/gh/ropensci/FedData?branch=master)
[![Zenodo DOI](https://zenodo.org/badge/DOI/10.5281/zenodo.596344.svg)](https://doi.org/10.5281/zenodo.596344)
[![ROpenSci Status](https://badges.ropensci.org/13_status.svg)](https://github.com/ropensci/software-review/issues/13)

`FedData` is an *R* package implementing functions to automate downloading geospatial data available from several federated data sources.

Currently, the package enables extraction from nine datasets: 

* The [National Elevation Dataset (NED)](https://www.usgs.gov/3d-elevation-program) digital elevation models (1 and 1/3 arc-second; USGS)
* The [National Hydrography Dataset (NHD)](https://www.usgs.gov/national-hydrography/national-hydrography-dataset) (USGS)
* The [Soil Survey Geographic (SSURGO) database](https://websoilsurvey.sc.egov.usda.gov/) from the National Cooperative Soil Survey (NCSS), which is led by the Natural Resources Conservation Service (NRCS) under the USDA
* The [Global Historical Climatology Network (GHCN)](https://www.ncei.noaa.gov/products/land-based-station/global-historical-climatology-network-daily), coordinated by National Climatic Data Center at NOAA
* The [Daymet](https://daymet.ornl.gov/) gridded estimates of daily weather parameters for North America, version 4, available from the Oak Ridge National Laboratory's Distributed Active Archive Center (DAAC)
* The [International Tree Ring Data Bank (ITRDB)](https://www.ncei.noaa.gov/products/paleoclimatology/tree-ring), coordinated by National Climatic Data Center at NOAA
* The [National Land Cover Database (NLCD)](https://www.mrlc.gov/), including the annual NLCD data
* The [NASS Cropland Data Layer](https://www.nass.usda.gov/Research_and_Science/Cropland/SARS1a.php) from the National Agricultural Statistics Service
* The [PAD-US](https://www.usgs.gov/programs/gap-analysis-project/science/pad-us-data-overview) dataset of 
protected area boundaries from the USGS

This package is designed with the large-scale geographic information system (GIS) use-case in mind: cases where the use of dynamic web-services is impractical due to the scale (spatial and/or temporal) of analysis. It functions primarily as a means of downloading tiled or otherwise spatially-defined datasets; additionally, it can preprocess those datasets by extracting data within an area of interest (AoI), defined spatially. It relies heavily on the [**sf**](https://cran.r-project.org/package=sf) and [**terra**](https://cran.r-project.org/package=terra) packages.

### Development
+ [Kyle Bocinsky](https://www.bocinsky.io) - Montana Climate Office, Missoula, MT

### Contributors
+ Dylan Beaudette - USDA-NRCS Soil Survey Office, Sonora, CA
+ Jeffrey Hollister - US EPA Atlantic Ecology Division, Narragansett, RI
+ Scott Chamberlain - ROpenSci and Museum of Paleontology at UC Berkeley

### Install `FedData`
+ From CRAN:
```{r install, eval = FALSE}
install.packages("FedData")
```

+ Development version from GitHub:
```{r install dev, eval = FALSE}
install.packages("devtools")
devtools::install_github("ropensci/FedData")
```
+ Linux:
Follow instructions for installing `sf` available at , then install either from CRAN or GitHub. 

### Getting Started
Check out our [Getting Started article](https://docs.ropensci.org/FedData/articles/FedData.html).

### Acknowledgements
This package is a product of SKOPE ([Synthesizing Knowledge of Past Environments](https://www.openskope.org/)) and the [Village Ecodynamics Project](https://crowcanyon.github.io/veparchaeology/) through grants awarded to the University of Montana, the [Crow Canyon Archaeological Center](https://crowcanyon.org/), and Washington State University by the National Science Foundation. This software is licensed under the [MIT license](https://opensource.org/license/mit). Continuing development is supported by the [Montana Climate Office](https://climate.umt.edu).

FedData was reviewed for [rOpenSci](https://ropensci.org) by [\@jooolia](https://github.com/jooolia), and was greatly improved as a result. [rOpenSci](https://ropensci.org) on-boarding was coordinated by [\@sckott](https://github.com/sckott).

Owner

Name: rOpenSci
Login: ropensci
Kind: organization
Email: info@ropensci.org
Location: Berkeley, CA

Website: https://ropensci.org/
Twitter: rOpenSci
Repositories: 307
Profile: https://github.com/ropensci

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GitHub Events

Total

Create event: 2
Release event: 2
Issues event: 21
Watch event: 6
Issue comment event: 30
Push event: 22
Pull request event: 1

Last Year

Create event: 2
Release event: 2
Issues event: 21
Watch event: 6
Issue comment event: 30
Push event: 22
Pull request event: 1

Committers

Last synced: 6 months ago

All Time

Total Commits: 583
Total Committers: 10
Avg Commits per committer: 58.3
Development Distribution Score (DDS): 0.134

Past Year

Commits: 15
Committers: 1
Avg Commits per committer: 15.0
Development Distribution Score (DDS): 0.0

Top Committers

Name	Email	Commits
Kyle Bocinsky	b**y@g**m	505
Bocinsky	b**y@B**l	58
Bocinsky	b**y@B**Z	7
Jeff Hollister	j**r@g**m	4
jsta	s**2@m**u	3
Bocinsky	b**y@b**n	2
Jeroen Ooms	j**s@g**m	1
Ben Marwick	b**k@h**m	1
user01	u****1	1
ropenscibot	m**t@g**m	1

Committer Domains (Top 20 + Academic)

bocinskys-mbp.lan: 1 msu.edu: 1 bocinskys-mbp.pk5001z: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time

Total issues: 119
Total pull requests: 8
Average time to close issues: 4 months
Average time to close pull requests: about 2 months
Total issue authors: 65
Total pull request authors: 5
Average comments per issue: 3.54
Average comments per pull request: 1.88
Merged pull requests: 7
Bot issues: 0
Bot pull requests: 0

Past Year

Issues: 12
Pull requests: 0
Average time to close issues: 28 days
Average time to close pull requests: N/A
Issue authors: 10
Pull request authors: 0
Average comments per issue: 1.67
Average comments per pull request: 0
Merged pull requests: 0
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Bot pull requests: 0

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Packages

Total packages: 3
Total downloads:
- cran 876 last-month
Total docker downloads: 88,618

Total dependent packages: 1
(may contain duplicates)
Total dependent repositories: 6
(may contain duplicates)
Total versions: 62
Total maintainers: 1

proxy.golang.org: github.com/ropensci/feddata

Documentation: https://pkg.go.dev/github.com/ropensci/feddata#section-documentation
License: other
Latest release: v4.3.0+incompatible
published 11 months ago

Versions: 11
Dependent Packages: 0
Dependent Repositories: 0

Rankings

Dependent packages count: 5.4%

Average: 5.6%

Dependent repos count: 5.8%

Last synced: 6 months ago

proxy.golang.org: github.com/ropensci/FedData

Documentation: https://pkg.go.dev/github.com/ropensci/FedData#section-documentation
License: other
Latest release: v4.3.0+incompatible
published 11 months ago

Versions: 11
Dependent Packages: 0
Dependent Repositories: 0

Rankings

Dependent packages count: 5.4%

Average: 5.6%

Dependent repos count: 5.8%

Last synced: 6 months ago

cran.r-project.org: FedData

Download Geospatial Data Available from Several Federated Data Sources

Homepage: https://docs.ropensci.org/FedData/
Documentation: http://cran.r-project.org/web/packages/FedData/FedData.pdf
License: MIT + file LICENSE
Latest release: 4.3.0
published 11 months ago

Versions: 40
Dependent Packages: 1
Dependent Repositories: 6
Downloads: 876 Last month
Docker Downloads: 88,618

Rankings

Docker downloads count: 0.0%

Forks count: 3.6%

Stargazers count: 4.2%

Average: 8.7%

Dependent repos count: 11.9%

Downloads: 14.1%

Dependent packages count: 18.1%

Maintainers (1)

bocinsky@gmail.com

Last synced: 6 months ago

Dependencies

DESCRIPTION cran

R >= 3.2.0 depends
curl * imports
data.table * imports
dplyr * imports
httr * imports
igraph * imports
jsonlite * imports
lifecycle * imports
lubridate * imports
magrittr * imports
methods * imports
progress * imports
purrr * imports
raster * imports
readr * imports
rgdal * imports
sf * imports
sp * imports
stringr * imports
terra * imports
tibble * imports
tidyr * imports
xml2 * imports
codemetar * suggests
covr * suggests
devtools * suggests
docopt * suggests
ggplot2 * suggests
lintr * suggests
pkgdown * suggests
precommit * suggests
roxygen2 * suggests
styler * suggests
testthat * suggests
usethis * suggests

.github/workflows/pkgdown.yaml actions

JamesIves/github-pages-deploy-action 4.1.4 composite
actions/checkout v2 composite
r-lib/actions/setup-pandoc v2 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

.github/workflows/pr-commands.yaml actions

actions/checkout v2 composite
r-lib/actions/pr-fetch v2 composite
r-lib/actions/pr-push v2 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

.github/workflows/test-coverage.yaml actions

actions/checkout v2 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

.github/workflows/check-standard.yaml actions

actions/checkout v3 composite
r-lib/actions/check-r-package v2 composite
r-lib/actions/setup-pandoc v2 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite