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Recent Releases of verticox

verticox - v1.0.6

What's Changed

  • 226 last tweaks documentation by @dsmits in https://github.com/CARRIER-project/verticox/pull/240
  • Fixed linting by @dsmits in https://github.com/CARRIER-project/verticox/pull/241

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v1.0.5...v1.0.6

- Jupyter Notebook
Published by dsmits over 1 year ago

verticox - v1.0.5

What's Changed

  • Added doi badge by @dsmits in https://github.com/CARRIER-project/verticox/pull/238

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v1.0.4...v1.0.5

- Jupyter Notebook
Published by dsmits over 1 year ago

verticox - v1.0.4

What's Changed

  • Upgraded download artifact action by @dsmits in https://github.com/CARRIER-project/verticox/pull/237

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v1.0.3...v1.0.4

- Jupyter Notebook
Published by dsmits over 1 year ago

verticox - v1.0.3

What's Changed

  • Release should build correctly now by @dsmits in https://github.com/CARRIER-project/verticox/pull/236

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v1.0.2...v1.0.3

- Jupyter Notebook
Published by dsmits over 1 year ago

verticox - v1.0.2

What's Changed

  • Fixed development page by @dsmits in https://github.com/CARRIER-project/verticox/pull/235

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v1.0.1...v1.0.2

- Jupyter Notebook
Published by dsmits over 1 year ago

verticox - v1.0.1

What's Changed

  • Fix java release build by @dsmits in https://github.com/CARRIER-project/verticox/pull/234

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v1.0.0...v1.0.1

- Jupyter Notebook
Published by dsmits over 1 year ago

verticox - v1.0.0

What's Changed

  • Updated demo notebook by @dsmits in https://github.com/CARRIER-project/verticox/pull/223
  • Removed most modules from api by @dsmits in https://github.com/CARRIER-project/verticox/pull/224
  • Added security risks by @dsmits in https://github.com/CARRIER-project/verticox/pull/230
  • 219 describe architecture by @dsmits in https://github.com/CARRIER-project/verticox/pull/228
  • Updated readme by @dsmits in https://github.com/CARRIER-project/verticox/pull/232
  • Development pointers by @dsmits in https://github.com/CARRIER-project/verticox/pull/231
  • Added quickstart by @dsmits in https://github.com/CARRIER-project/verticox/pull/233

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v0.7.3...v1.0.0

- Jupyter Notebook
Published by dsmits over 1 year ago

verticox - v0.7.3

What's Changed

  • Add zenodo badge by @dsmits in https://github.com/CARRIER-project/verticox/pull/193
  • Reran benchmark by @dsmits in https://github.com/CARRIER-project/verticox/pull/195
  • Added benchmark of original algorithm by @dsmits in https://github.com/CARRIER-project/verticox/pull/197
  • Update README.md by @dsmits in https://github.com/CARRIER-project/verticox/pull/184
  • Update build_java.yml by @dsmits in https://github.com/CARRIER-project/verticox/pull/201
  • New dummy branch by @dsmits in https://github.com/CARRIER-project/verticox/pull/202
  • Update gh actions deps by @dsmits in https://github.com/CARRIER-project/verticox/pull/204
  • Data imputation by @dsmits in https://github.com/CARRIER-project/verticox/pull/203
  • Cleaned up logs by @dsmits in https://github.com/CARRIER-project/verticox/pull/207
  • Added makefile by @dsmits in https://github.com/CARRIER-project/verticox/pull/211
  • Switched to pyproject structure without poetry by @dsmits in https://github.com/CARRIER-project/verticox/pull/212
  • Converted to mkdocs by @dsmits in https://github.com/CARRIER-project/verticox/pull/213
  • Deploy page workflow by @dsmits in https://github.com/CARRIER-project/verticox/pull/214
  • 206 add algorithm store metadata by @dsmits in https://github.com/CARRIER-project/verticox/pull/217
  • 220 move algorithm to official vantage6 docker registry by @dsmits in https://github.com/CARRIER-project/verticox/pull/221

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v0.7.2...v0.7.3

- Jupyter Notebook
Published by dsmits over 1 year ago

verticox - Small fixes

What's Changed

  • Stratified sampling for testing by @dsmits in https://github.com/CARRIER-project/verticox/pull/192
  • Fixed build

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v0.7.0...v0.7.2

- Jupyter Notebook
Published by dsmits over 1 year ago

verticox - v0.7.1

Nothing significant has changed. Releasing to make sure verticox is published to Zenodo

- Jupyter Notebook
Published by dsmits almost 2 years ago

verticox - v0.7.0

What's Changed

  • 185 fixed failing build by @dsmits in https://github.com/CARRIER-project/verticox/pull/186
  • Restructure by @dsmits in https://github.com/CARRIER-project/verticox/pull/187
  • Added example .env file to mock dir by @dsmits in https://github.com/CARRIER-project/verticox/pull/188
  • fixed benchmark by @dsmits in https://github.com/CARRIER-project/verticox/pull/189
  • Made verticox basically 10 times faster by @dsmits in https://github.com/CARRIER-project/verticox/pull/190

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v0.6.0...v0.7.0

- Jupyter Notebook
Published by dsmits almost 2 years ago

verticox - v0.6.0

Updated to be compatible with vantage6 v4

What's Changed

  • 145 refine benchmark by @dsmits in https://github.com/CARRIER-project/verticox/pull/150
  • 151 bug benchmark crashes on javalangillegalargumentexception uri is not absolute by @dsmits in https://github.com/CARRIER-project/verticox/pull/152
  • Described verticox+ algorithm by @dsmits in https://github.com/CARRIER-project/verticox/pull/154
  • 157 prepare aids dataset by @dsmits in https://github.com/CARRIER-project/verticox/pull/158
  • Added comparison metrics by @dsmits in https://github.com/CARRIER-project/verticox/pull/161
  • Categorical columns are included now. by @dsmits in https://github.com/CARRIER-project/verticox/pull/163
  • 170 upgrade verticox to vantage6 version 4 by @dsmits in https://github.com/CARRIER-project/verticox/pull/171
  • Catching linalgwarnings by @dsmits in https://github.com/CARRIER-project/verticox/pull/172
  • Added seer dataset by @dsmits in https://github.com/CARRIER-project/verticox/pull/174
  • 165 limit execution to specific number of iterations by @dsmits in https://github.com/CARRIER-project/verticox/pull/177
  • Separated runtime measuring by @dsmits in https://github.com/CARRIER-project/verticox/pull/175
  • Infer whether to check results based on whether num iterations is by @dsmits in https://github.com/CARRIER-project/verticox/pull/178
  • 176 read benchmark parameters from config file by @dsmits in https://github.com/CARRIER-project/verticox/pull/180
  • 181 order the variable selection so not all dummy variables of a single categorical one are in the dataset by @dsmits in https://github.com/CARRIER-project/verticox/pull/182

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v0.5.0...v0.6.0

- Jupyter Notebook
Published by dsmits over 2 years ago

verticox - More descriptive output

What's Changed

  • Make sure baseline hazard is serializable and returned as result by @dsmits in https://github.com/CARRIER-project/verticox/pull/142
  • Different kinds of integration tests are now subcommands by @dsmits in https://github.com/CARRIER-project/verticox/pull/143
  • 37 benchmark verticox with multiple features by @dsmits in https://github.com/CARRIER-project/verticox/pull/144
  • 141 demo notebook by @dsmits in https://github.com/CARRIER-project/verticox/pull/148
  • 98 parse results in verticox client by @dsmits in https://github.com/CARRIER-project/verticox/pull/149

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v0.4.0...v0.5.0

- Jupyter Notebook
Published by dsmits over 2 years ago

verticox - Cross validation

This version includes the c-score performance metric and cross validation

- Jupyter Notebook
Published by dsmits over 2 years ago

verticox - Baseline hazard

This release introduces the baseline hazard function as an additional result in the verticox computation.

- Jupyter Notebook
Published by dsmits about 3 years ago

verticox - v6 version update

- Jupyter Notebook
Published by dsmits over 3 years ago

verticox - Verticox+

What's Changed

We moved from regular verticox to verticox+. In verticox+ the outcome data doesn't have to be shared with all nodes.

  • 23 client interface by @dsmits in https://github.com/CARRIER-project/verticox/pull/33
  • Get_featurenames gives proper output by @dsmits in https://github.com/CARRIER-project/verticox/pull/34
  • Added instructions in readme by @dsmits in https://github.com/CARRIER-project/verticox/pull/38
  • Upgraded vantage6 to latest version by @dsmits in https://github.com/CARRIER-project/verticox/pull/44
  • Merge verticox+ to main branch by @dsmits in https://github.com/CARRIER-project/verticox/pull/62
  • 60 add java to ci by @dsmits in https://github.com/CARRIER-project/verticox/pull/70

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v0.1.2...v0.2.0

- Jupyter Notebook
Published by dsmits over 3 years ago

verticox - Performance increase

What's Changed

  • Add paralellization by @dsmits in https://github.com/CARRIER-project/verticox/pull/32

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v0.1.1...v0.1.2

- Jupyter Notebook
Published by dsmits almost 4 years ago

verticox - Patch

What's Changed

  • Downgraded vantage6-client package by @dsmits in https://github.com/CARRIER-project/verticox/pull/30

Full Changelog: https://github.com/CARRIER-project/verticox/compare/v0.1.0...v0.1.1

- Jupyter Notebook
Published by dsmits almost 4 years ago

verticox - v0.1.0

What's Changed

  • Verticox scalar product wrapper by @fvandaalen in https://github.com/CARRIER-project/verticox/pull/5
  • 9 kill function for datanodes by @dsmits in https://github.com/CARRIER-project/verticox/pull/15
  • 10 ci automated testing by @dsmits in https://github.com/CARRIER-project/verticox/pull/16
  • 17 integrate into vantage6 by @dsmits in https://github.com/CARRIER-project/verticox/pull/20
  • 11 ci push new algorithms to harbor by @dsmits in https://github.com/CARRIER-project/verticox/pull/21
  • Moved unittests to appropriate modules by @dsmits in https://github.com/CARRIER-project/verticox/pull/24
  • 19 improve performance by @dsmits in https://github.com/CARRIER-project/verticox/pull/25
  • Keep track of feature names by @dsmits in https://github.com/CARRIER-project/verticox/pull/28

New Contributors

  • @fvandaalen made their first contribution in https://github.com/CARRIER-project/verticox/pull/5
  • @dsmits made their first contribution in https://github.com/CARRIER-project/verticox/pull/15

Full Changelog: https://github.com/CARRIER-project/verticox/commits/v0.1.3

- Jupyter Notebook
Published by dsmits almost 4 years ago