nprcgenekeepr

Implements Genetic Tools for Colony Management

https://github.com/rmsharp/nprcgenekeepr

Science Score: 44.0%

This score indicates how likely this project is to be science-related based on various indicators:

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CITATION.cff file
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Scientific vocabulary similarity
Low similarity (12.7%) to scientific vocabulary

Last synced: 7 months ago · JSON representation ·

Repository

Implements Genetic Tools for Colony Management

Basic Info

Host: GitHub
Owner: rmsharp
License: other
Language: R
Default Branch: master
Size: 90 MB

Statistics

Stars: 0
Watchers: 1
Forks: 4
Open Issues: 15
Releases: 3

Created about 9 years ago · Last pushed 9 months ago

Metadata Files

Readme Changelog License Code of conduct Citation

README.Rmd

---
title: "README"
author: "R. Mark Sharp, Ph.D."
date: "2025-07-25"
output: github_document
---

# nprcgenekeepr 

`r paste0("\n Version ", nprcgenekeepr::getVersion())`



[![Project Status: Active – The project has reached a stable, usable state and is being actively developed.](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active)
[![lifecycle](https://img.shields.io/badge/lifecycle-stable-brightgreen.svg)](https://lifecycle.r-lib.org/articles/stages.html)
[![R-CMD-check](https://github.com/rmsharp/nprcgenekeepr/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/rmsharp/nprcgenekeepr/actions/workflows/R-CMD-check.yaml)
[![Codecov test coverage](https://codecov.io/gh/rmsharp/nprcgenekeepr/graph/badge.svg)](https://app.codecov.io/gh/rmsharp/nprcgenekeepr)
[![CRAN status](https://www.r-pkg.org/badges/version/nprcgenekeepr)](https://CRAN.R-project.org/package=nprcgenekeepr)


```{r, echo = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "README-"
)
```

```{r child = "vignettes/manual_components/_introduction.Rmd", ref = "introduction"}
```
```{r child = "vignettes/manual_components/_installation.Rmd", ref = "installation"}
```

```{r child = "vignettes/manual_components/_online_documentation.Rmd", ref = "online_documentation"}
```


```{r child = "vignettes/manual_components/_running_shiny_application.Rmd", ref = "running_shiny_application"}
```
```{r child = "vignettes/manual_components/_summary_of_major_functions.Rmd", ref = "summary_of_functions"}
```

**For more information see:**  
A Practical Approach for Designing Breeding Groups to Maximize Genetic 
Diversity in a Large Colony of Captive Rhesus Macaques (*Macaca mulatto*)
Vinson, A ; Raboin, MJ
*Journal Of The American Association For Laboratory Animal Science*, 
2015 Nov, Vol.54(6), pp.700-707 [Peer Reviewed Journal]

Owner

Name: R. Mark Sharp
Login: rmsharp
Kind: user
Location: San Antonio, Texas, USA

Repositories: 11
Profile: https://github.com/rmsharp

Immunogenetics Scientist 1976-1993; Statistical Analyst 1978-present; Data Science 1993 to present; Database development supervisor 1993-2017.

Citation (CITATION.cff)

# --------------------------------------------
# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
# --------------------------------------------
 
cff-version: 1.2.0
message: 'To cite package "nprcgenekeepr" in publications use:'
type: software
license: MIT
title: 'nprcgenekeepr: Genetic Tools for Colony Management'
version: 1.0.7
abstract: 'Provides genetic tools for colony management and is a derivation of the
  work in Amanda Vinson and Michael J Raboin (2015) <https://pmc.ncbi.nlm.nih.gov/articles/PMC4671785/>
  "A Practical Approach for Designing Breeding Groups to Maximize Genetic Diversity
  in a Large Colony of Captive Rhesus Macaques (''Macaca'' ''mulatto'')". It provides
  a ''Shiny'' application with an exposed API. The application supports five groups
  of functions: (1) Quality control of studbooks contained in text files or ''Excel''
  workbooks and of pedigrees within ''LabKey'' Electronic Health Records (EHR); (2)
  Creation of pedigrees from a list of animals using the ''LabKey'' EHR integration;
  (3) Creation and display of an age by sex pyramid plot of the living animals within
  the designated pedigree; (4) Generation of genetic value analysis reports; and (5)
  Creation of potential breeding groups with and without proscribed sex ratios and
  defined maximum kinships.'
authors:
- family-names: Raboin
  given-names: Michael
- family-names: Therneau
  given-names: Terry
- family-names: Vinson
  given-names: Amanda
- family-names: Sharp
  given-names: R. Mark
  email: rmsharp@me.com
  orcid: https://orcid.org/0000-0002-6170-6942
- family-names: Schultz
  given-names: Matthew
  orcid: https://orcid.org/0000-0001-5103-4305
repository-code: https://github.com/rmsharp/nprcgenekeepr
url: https://rmsharp.github.io/nprcgenekeepr/
contact:
- family-names: Sharp
  given-names: R. Mark
  email: rmsharp@me.com
  orcid: https://orcid.org/0000-0002-6170-6942
references:
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  title: 'R: A Language and Environment for Statistical Computing'
  notes: Depends
  url: https://www.R-project.org/
  authors:
  - name: R Core Team
  institution:
    name: R Foundation for Statistical Computing
    address: Vienna, Austria
  year: '2025'
  version: '>= 3.6.0'
- type: software
  title: anytime
  abstract: 'anytime: Anything to ''POSIXct'' or ''Date'' Converter'
  notes: Imports
  url: https://dirk.eddelbuettel.com/code/anytime.html
  repository: https://CRAN.R-project.org/package=anytime
  authors:
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    given-names: Dirk
    email: edd@debian.org
    orcid: https://orcid.org/0000-0001-6419-907X
  year: '2025'
  doi: 10.32614/CRAN.package.anytime
- type: software
  title: data.table
  abstract: 'data.table: Extension of `data.frame`'
  notes: Imports
  url: https://r-datatable.com
  repository: https://CRAN.R-project.org/package=data.table
  authors:
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    given-names: Tyson
    email: t.barrett88@gmail.com
    orcid: https://orcid.org/0000-0002-2137-1391
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  abstract: 'futile.logger: A Logging Utility for R'
  notes: Imports
  repository: https://CRAN.R-project.org/package=futile.logger
  authors:
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    given-names: Brian Lee Yung
  year: '2025'
  doi: 10.32614/CRAN.package.futile.logger
- type: software
  title: htmlTable
  abstract: 'htmlTable: Advanced Tables for Markdown/HTML'
  notes: Imports
  url: https://gforge.se/packages/
  repository: https://CRAN.R-project.org/package=htmlTable
  authors:
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    email: max@gforge.se
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  - family-names: Konings
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  year: '2025'
  doi: 10.32614/CRAN.package.htmlTable
- type: software
  title: lifecycle
  abstract: 'lifecycle: Manage the Life Cycle of your Package Functions'
  notes: Imports
  url: https://lifecycle.r-lib.org/
  repository: https://CRAN.R-project.org/package=lifecycle
  authors:
  - family-names: Henry
    given-names: Lionel
    email: lionel@posit.co
  - family-names: Wickham
    given-names: Hadley
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    orcid: https://orcid.org/0000-0003-4757-117X
  year: '2025'
  doi: 10.32614/CRAN.package.lifecycle
- type: software
  title: lubridate
  abstract: 'lubridate: Make Dealing with Dates a Little Easier'
  notes: Imports
  url: https://lubridate.tidyverse.org
  repository: https://CRAN.R-project.org/package=lubridate
  authors:
  - family-names: Spinu
    given-names: Vitalie
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  - family-names: Grolemund
    given-names: Garrett
  - family-names: Wickham
    given-names: Hadley
  year: '2025'
  doi: 10.32614/CRAN.package.lubridate
- type: software
  title: Matrix
  abstract: 'Matrix: Sparse and Dense Matrix Classes and Methods'
  notes: Imports
  url: https://Matrix.R-forge.R-project.org
  repository: https://CRAN.R-project.org/package=Matrix
  authors:
  - family-names: Bates
    given-names: Douglas
    orcid: https://orcid.org/0000-0001-8316-9503
  - family-names: Maechler
    given-names: Martin
    email: mmaechler+Matrix@gmail.com
    orcid: https://orcid.org/0000-0002-8685-9910
  - family-names: Jagan
    given-names: Mikael
    orcid: https://orcid.org/0000-0002-3542-2938
  year: '2025'
  doi: 10.32614/CRAN.package.Matrix
- type: software
  title: plotrix
  abstract: 'plotrix: Various Plotting Functions'
  notes: Imports
  url: https://github.com/dmurdoch/plotrix
  repository: https://CRAN.R-project.org/package=plotrix
  authors:
  - family-names: Lemon
    given-names: Jim
  - family-names: Bolker
    given-names: Ben
  - family-names: Oom
    given-names: Sander
  - family-names: Klein
    given-names: Eduardo
  - family-names: Rowlingson
    given-names: Barry
  - family-names: Wickham
    given-names: Hadley
  - family-names: Tyagi
    given-names: Anupam
  - family-names: Eterradossi
    given-names: Olivier
  - family-names: Grothendieck
    given-names: Gabor
  - family-names: Toews
    given-names: Michael
  - family-names: Kane
    given-names: John
  - family-names: Turner
    given-names: Rolf
  - family-names: Witthoft
    given-names: Carl
  - family-names: Stander
    given-names: Julian
  - family-names: Petzoldt
    given-names: Thomas
  - family-names: Duursma
    given-names: Remko
  - family-names: Biancotto
    given-names: Elisa
  - family-names: Levy
    given-names: Ofir
  - family-names: Dutang
    given-names: Christophe
  - family-names: Solymos
    given-names: Peter
  - family-names: Engelmann
    given-names: Robby
  - family-names: Hecker
    given-names: Michael
  - family-names: Steinbeck
    given-names: Felix
  - family-names: Borchers
    given-names: Hans
  - family-names: Singmann
    given-names: Henrik
  - family-names: Toal
    given-names: Ted
  - family-names: Ogle
    given-names: Derek
  - family-names: Baral
    given-names: Darshan
  - family-names: Groemping
    given-names: Ulrike
  - family-names: Venables
    given-names: Bill
  - family-names: Team
    given-names: The CRAN
  - family-names: Murdoch
    given-names: Duncan
  year: '2025'
  doi: 10.32614/CRAN.package.plotrix
- type: software
  title: readxl
  abstract: 'readxl: Read Excel Files'
  notes: Imports
  url: https://readxl.tidyverse.org
  repository: https://CRAN.R-project.org/package=readxl
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
    orcid: https://orcid.org/0000-0003-4757-117X
  - family-names: Bryan
    given-names: Jennifer
    email: jenny@posit.co
    orcid: https://orcid.org/0000-0002-6983-2759
  year: '2025'
  doi: 10.32614/CRAN.package.readxl
- type: software
  title: Rlabkey
  abstract: 'Rlabkey: Data Exchange Between R and ''LabKey'' Server'
  notes: Imports
  repository: https://CRAN.R-project.org/package=Rlabkey
  authors:
  - family-names: Hussey
    given-names: Peter
  year: '2025'
  doi: 10.32614/CRAN.package.Rlabkey
- type: software
  title: sessioninfo
  abstract: 'sessioninfo: R Session Information'
  notes: Imports
  url: https://github.com/r-lib/sessioninfo#readme
  repository: https://CRAN.R-project.org/package=sessioninfo
  authors:
  - family-names: Wickham
    given-names: Hadley
  - family-names: Chang
    given-names: Winston
  - family-names: Flight
    given-names: Robert
  - family-names: Müller
    given-names: Kirill
  - family-names: Hester
    given-names: Jim
  year: '2025'
  doi: 10.32614/CRAN.package.sessioninfo
- type: software
  title: shiny
  abstract: 'shiny: Web Application Framework for R'
  notes: Imports
  url: https://shiny.posit.co/
  repository: https://CRAN.R-project.org/package=shiny
  authors:
  - family-names: Chang
    given-names: Winston
    email: winston@posit.co
    orcid: https://orcid.org/0000-0002-1576-2126
  - family-names: Cheng
    given-names: Joe
    email: joe@posit.co
  - family-names: Allaire
    given-names: JJ
    email: jj@posit.co
  - family-names: Sievert
    given-names: Carson
    email: carson@posit.co
    orcid: https://orcid.org/0000-0002-4958-2844
  - family-names: Schloerke
    given-names: Barret
    email: barret@posit.co
    orcid: https://orcid.org/0000-0001-9986-114X
  - family-names: Xie
    given-names: Yihui
    email: yihui@posit.co
  - family-names: Allen
    given-names: Jeff
  - family-names: McPherson
    given-names: Jonathan
    email: jonathan@posit.co
  - family-names: Dipert
    given-names: Alan
  - family-names: Borges
    given-names: Barbara
  year: '2025'
  doi: 10.32614/CRAN.package.shiny
- type: software
  title: stringi
  abstract: 'stringi: Fast and Portable Character String Processing Facilities'
  notes: Imports
  url: https://stringi.gagolewski.com/
  repository: https://CRAN.R-project.org/package=stringi
  authors:
  - family-names: Gagolewski
    given-names: Marek
    orcid: https://orcid.org/0000-0003-0637-6028
  - family-names: Tartanus
    given-names: Bartek
  - family-names: Unicode
    given-names: others;
  - name: Inc.
  - name: others
  year: '2025'
  doi: 10.32614/CRAN.package.stringi
- type: software
  title: utils
  abstract: 'R: A Language and Environment for Statistical Computing'
  notes: Imports
  authors:
  - name: R Core Team
  institution:
    name: R Foundation for Statistical Computing
    address: Vienna, Austria
  year: '2025'
- type: software
  title: WriteXLS
  abstract: 'WriteXLS: Cross-Platform Perl Based R Function to Create Excel 2003 (XLS)
    and Excel 2007 (XLSX) Files'
  notes: Imports
  url: https://github.com/marcschwartz/WriteXLS
  repository: https://CRAN.R-project.org/package=WriteXLS
  authors:
  - family-names: Schwartz
    given-names: Marc
    email: marc_schwartz@me.com
  - family-names: file.
    given-names: various authors for Perl modules listed in each .pm
  year: '2025'
  doi: 10.32614/CRAN.package.WriteXLS
- type: software
  title: covr
  abstract: 'covr: Test Coverage for Packages'
  notes: Suggests
  url: https://covr.r-lib.org
  repository: https://CRAN.R-project.org/package=covr
  authors:
  - family-names: Hester
    given-names: Jim
    email: james.f.hester@gmail.com
  year: '2025'
  doi: 10.32614/CRAN.package.covr
- type: software
  title: dplyr
  abstract: 'dplyr: A Grammar of Data Manipulation'
  notes: Suggests
  url: https://dplyr.tidyverse.org
  repository: https://CRAN.R-project.org/package=dplyr
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
    orcid: https://orcid.org/0000-0003-4757-117X
  - family-names: François
    given-names: Romain
    orcid: https://orcid.org/0000-0002-2444-4226
  - family-names: Henry
    given-names: Lionel
  - family-names: Müller
    given-names: Kirill
    orcid: https://orcid.org/0000-0002-1416-3412
  - family-names: Vaughan
    given-names: Davis
    email: davis@posit.co
    orcid: https://orcid.org/0000-0003-4777-038X
  year: '2025'
  doi: 10.32614/CRAN.package.dplyr
- type: software
  title: ggplot2
  abstract: 'ggplot2: Create Elegant Data Visualisations Using the Grammar of Graphics'
  notes: Suggests
  url: https://ggplot2.tidyverse.org
  repository: https://CRAN.R-project.org/package=ggplot2
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
    orcid: https://orcid.org/0000-0003-4757-117X
  - family-names: Chang
    given-names: Winston
    orcid: https://orcid.org/0000-0002-1576-2126
  - family-names: Henry
    given-names: Lionel
  - family-names: Pedersen
    given-names: Thomas Lin
    email: thomas.pedersen@posit.co
    orcid: https://orcid.org/0000-0002-5147-4711
  - family-names: Takahashi
    given-names: Kohske
  - family-names: Wilke
    given-names: Claus
    orcid: https://orcid.org/0000-0002-7470-9261
  - family-names: Woo
    given-names: Kara
    orcid: https://orcid.org/0000-0002-5125-4188
  - family-names: Yutani
    given-names: Hiroaki
    orcid: https://orcid.org/0000-0002-3385-7233
  - family-names: Dunnington
    given-names: Dewey
    orcid: https://orcid.org/0000-0002-9415-4582
  - family-names: Brand
    given-names: Teun
    name-particle: van den
    orcid: https://orcid.org/0000-0002-9335-7468
  year: '2025'
  doi: 10.32614/CRAN.package.ggplot2
- type: software
  title: grid
  abstract: 'R: A Language and Environment for Statistical Computing'
  notes: Suggests
  authors:
  - name: R Core Team
  institution:
    name: R Foundation for Statistical Computing
    address: Vienna, Austria
  year: '2025'
- type: software
  title: kableExtra
  abstract: 'kableExtra: Construct Complex Table with ''kable'' and Pipe Syntax'
  notes: Suggests
  url: http://haozhu233.github.io/kableExtra/
  repository: https://CRAN.R-project.org/package=kableExtra
  authors:
  - family-names: Zhu
    given-names: Hao
    email: haozhu233@gmail.com
    orcid: https://orcid.org/0000-0002-3386-6076
  year: '2025'
  doi: 10.32614/CRAN.package.kableExtra
- type: software
  title: knitr
  abstract: 'knitr: A General-Purpose Package for Dynamic Report Generation in R'
  notes: Suggests
  url: https://yihui.org/knitr/
  repository: https://CRAN.R-project.org/package=knitr
  authors:
  - family-names: Xie
    given-names: Yihui
    email: xie@yihui.name
    orcid: https://orcid.org/0000-0003-0645-5666
  year: '2025'
  doi: 10.32614/CRAN.package.knitr
- type: software
  title: markdown
  abstract: 'markdown: Render Markdown with ''commonmark'''
  notes: Suggests
  url: https://github.com/rstudio/markdown
  repository: https://CRAN.R-project.org/package=markdown
  authors:
  - family-names: Xie
    given-names: Yihui
    email: xie@yihui.name
    orcid: https://orcid.org/0000-0003-0645-5666
  - family-names: Allaire
    given-names: JJ
  - family-names: Horner
    given-names: Jeffrey
  year: '2025'
  doi: 10.32614/CRAN.package.markdown
- type: software
  title: pkgdown
  abstract: 'pkgdown: Make Static HTML Documentation for a Package'
  notes: Suggests
  url: https://pkgdown.r-lib.org/
  repository: https://CRAN.R-project.org/package=pkgdown
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
    orcid: https://orcid.org/0000-0003-4757-117X
  - family-names: Hesselberth
    given-names: Jay
    orcid: https://orcid.org/0000-0002-6299-179X
  - family-names: Salmon
    given-names: Maëlle
    orcid: https://orcid.org/0000-0002-2815-0399
  - family-names: Roy
    given-names: Olivier
  - family-names: Brüggemann
    given-names: Salim
    orcid: https://orcid.org/0000-0002-5329-5987
  year: '2025'
  doi: 10.32614/CRAN.package.pkgdown
- type: software
  title: png
  abstract: 'png: Read and write PNG images'
  notes: Suggests
  url: http://www.rforge.net/png/
  repository: https://CRAN.R-project.org/package=png
  authors:
  - family-names: Urbanek
    given-names: Simon
    email: Simon.Urbanek@r-project.org
  year: '2025'
  doi: 10.32614/CRAN.package.png
- type: software
  title: rmarkdown
  abstract: 'rmarkdown: Dynamic Documents for R'
  notes: Suggests
  url: https://pkgs.rstudio.com/rmarkdown/
  repository: https://CRAN.R-project.org/package=rmarkdown
  authors:
  - family-names: Allaire
    given-names: JJ
    email: jj@posit.co
  - family-names: Xie
    given-names: Yihui
    email: xie@yihui.name
    orcid: https://orcid.org/0000-0003-0645-5666
  - family-names: Dervieux
    given-names: Christophe
    email: cderv@posit.co
    orcid: https://orcid.org/0000-0003-4474-2498
  - family-names: McPherson
    given-names: Jonathan
    email: jonathan@posit.co
  - family-names: Luraschi
    given-names: Javier
  - family-names: Ushey
    given-names: Kevin
    email: kevin@posit.co
  - family-names: Atkins
    given-names: Aron
    email: aron@posit.co
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
  - family-names: Cheng
    given-names: Joe
    email: joe@posit.co
  - family-names: Chang
    given-names: Winston
    email: winston@posit.co
  - family-names: Iannone
    given-names: Richard
    email: rich@posit.co
    orcid: https://orcid.org/0000-0003-3925-190X
  year: '2025'
  doi: 10.32614/CRAN.package.rmarkdown
- type: software
  title: roxygen2
  abstract: 'roxygen2: In-Line Documentation for R'
  notes: Suggests
  url: https://roxygen2.r-lib.org/
  repository: https://CRAN.R-project.org/package=roxygen2
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
    orcid: https://orcid.org/0000-0003-4757-117X
  - family-names: Danenberg
    given-names: Peter
    email: pcd@roxygen.org
  - family-names: Csárdi
    given-names: Gábor
    email: csardi.gabor@gmail.com
  - family-names: Eugster
    given-names: Manuel
  year: '2025'
  doi: 10.32614/CRAN.package.roxygen2
  version: '>= 7.3.2'
- type: software
  title: shinyBS
  abstract: 'shinyBS: Twitter Bootstrap Components for Shiny'
  notes: Suggests
  url: https://ebailey78.github.io/shinyBS
  repository: https://CRAN.R-project.org/package=shinyBS
  authors:
  - family-names: Bailey
    given-names: Eric
  year: '2025'
  doi: 10.32614/CRAN.package.shinyBS
- type: software
  title: shinyWidgets
  abstract: 'shinyWidgets: Custom Inputs Widgets for Shiny'
  notes: Suggests
  url: https://dreamrs.github.io/shinyWidgets/
  repository: https://CRAN.R-project.org/package=shinyWidgets
  authors:
  - family-names: Perrier
    given-names: Victor
    email: victor.perrier@dreamrs.fr
  - family-names: Meyer
    given-names: Fanny
  - family-names: Granjon
    given-names: David
  year: '2025'
  doi: 10.32614/CRAN.package.shinyWidgets
- type: software
  title: spelling
  abstract: 'spelling: Tools for Spell Checking in R'
  notes: Suggests
  url: https://ropensci.r-universe.dev/spelling
  repository: https://CRAN.R-project.org/package=spelling
  authors:
  - family-names: Ooms
    given-names: Jeroen
    email: jeroenooms@gmail.com
    orcid: https://orcid.org/0000-0002-4035-0289
  - family-names: Hester
    given-names: Jim
    email: james.hester@rstudio.com
  year: '2025'
  doi: 10.32614/CRAN.package.spelling
- type: software
  title: testthat
  abstract: 'testthat: Unit Testing for R'
  notes: Suggests
  url: https://testthat.r-lib.org
  repository: https://CRAN.R-project.org/package=testthat
  authors:
  - family-names: Wickham
    given-names: Hadley
    email: hadley@posit.co
  year: '2025'
  doi: 10.32614/CRAN.package.testthat

GitHub Events

Total

Create event: 2
Release event: 1
Issues event: 2
Delete event: 1
Push event: 83
Fork event: 1

Last Year

Create event: 2
Release event: 1
Issues event: 2
Delete event: 1
Push event: 83
Fork event: 1

Committers

Last synced: about 3 years ago

All Time

Total Commits: 1,067
Total Committers: 2
Avg Commits per committer: 533.5
Development Distribution Score (DDS): 0.202

Top Committers

Name	Email	Commits
rmsharp	r**p@m**m	851
R. Mark Sharp	m**p@T**g	216

Committer Domains (Top 20 + Academic)

txbiomed.org: 1 me.com: 1

Packages

Total packages: 1
Total downloads:
- cran 625 last-month

Total dependent packages: 0
Total dependent repositories: 0
Total versions: 4
Total maintainers: 1

cran.r-project.org: nprcgenekeepr

Genetic Tools for Colony Management

Homepage: https://rmsharp.github.io/nprcgenekeepr/
Documentation: http://cran.r-project.org/web/packages/nprcgenekeepr/nprcgenekeepr.pdf
License: MIT + file LICENSE
Status: removed
Latest release: 1.0.8
published 9 months ago

Versions: 4
Dependent Packages: 0
Dependent Repositories: 0
Downloads: 625 Last month

Rankings

Forks count: 14.9%

Average: 28.8%

Dependent packages count: 29.8%

Stargazers count: 35.2%

Dependent repos count: 35.5%

Maintainers (1)

rmsharp@me.com

Last synced: 7 months ago

Dependencies

DESCRIPTION cran

R >= 3.6.0 depends
Matrix * imports
Rlabkey * imports
WriteXLS * imports
anytime * imports
futile.logger * imports
htmlTable * imports
lubridate * imports
plotrix * imports
readxl * imports
rlang * imports
shiny * imports
stringi * imports
utils * imports
covr * suggests
dplyr * suggests
ggplot2 * suggests
grid * suggests
kableExtra * suggests
knitr * suggests
markdown * suggests
pkgdown * suggests
png * suggests
rmarkdown * suggests
roxygen2 >= 7.0.0 suggests
shinyBS * suggests
shinyWidgets * suggests
testthat * suggests

.github/workflows/R-CMD-check.yaml actions

actions/checkout v4 composite
r-lib/actions/check-r-package v2 composite
r-lib/actions/setup-pandoc v2 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

.github/workflows/lint.yaml actions

actions/checkout v4 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

.github/workflows/pkgdown.yaml actions

JamesIves/github-pages-deploy-action v4.5.0 composite
actions/checkout v4 composite
r-lib/actions/setup-pandoc v2 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

.github/workflows/rhub.yaml actions

r-hub/actions/checkout v1 composite
r-hub/actions/platform-info v1 composite
r-hub/actions/run-check v1 composite
r-hub/actions/setup v1 composite
r-hub/actions/setup-deps v1 composite
r-hub/actions/setup-r v1 composite

.github/workflows/test-coverage.yaml actions

actions/checkout v4 composite
actions/upload-artifact v4 composite
codecov/codecov-action v4 composite
r-lib/actions/setup-r v2 composite
r-lib/actions/setup-r-dependencies v2 composite

ecosyste.ms

Data

Tools

Indexes

Applications

Experiments

Open Source Science