Science Score: 10.0%
This score indicates how likely this project is to be science-related based on various indicators:
-
○CITATION.cff file
-
○codemeta.json file
-
○.zenodo.json file
-
○DOI references
-
○Academic publication links
-
✓Committers with academic emails
5 of 7 committers (71.4%) from academic institutions -
○Institutional organization owner
-
○JOSS paper metadata
-
○Scientific vocabulary similarity
Low similarity (2.8%) to scientific vocabulary
Keywords
bioinformatics
eclip
ngs-analysis
Keywords from Contributors
gene
bioconductor-package
ontology
immune-repertoire
spatial-data
bulk-transcriptional-analyses
differential-expression
edger
ensembl-ids
entrez
Last synced: 10 months ago
·
JSON representation
Repository
R/Bioconductor package for e/iCLIP data analysis
Basic Info
Statistics
- Stars: 5
- Watchers: 3
- Forks: 0
- Open Issues: 1
- Releases: 0
Topics
bioinformatics
eclip
ngs-analysis
Created almost 7 years ago
· Last pushed over 2 years ago
Metadata Files
Readme
README.md
DEWSeq
An R package for the analysis of eCLIP and iCLIP data using sliding window approach.
Bioconductor page: https://bioconductor.org/packages/release/bioc/html/DEWSeq.html
Vignette: https://bioconductor.org/packages/release/bioc/vignettes/DEWSeq/inst/doc/DEWSeq.html
Bug reports: https://github.com/EMBL-Hentze-group/DEWSeq/issues
Owner
- Name: EMBL Hentze group
- Login: EMBL-Hentze-group
- Kind: organization
- Location: Heidelberg
- Website: http://www.hentze.embl.de/
- Repositories: 6
- Profile: https://github.com/EMBL-Hentze-group
Github page for Hentze group at EMBL Heidelberg
GitHub Events
Total
Last Year
Committers
Last synced: almost 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| sahadeva | s****n@e****e | 160 |
| Thomas Schwarzl | t****l@e****e | 58 |
| Nitesh Turaga | n****a@g****m | 12 |
| J Wokaty | j****y@s****u | 2 |
| Hervé Pagès | h****b@g****m | 1 |
| Sudeep Sahadevan | s****a@s****e | 1 |
| hentzelab | b****e@e****e | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 10 months ago
All Time
- Total issues: 12
- Total pull requests: 1
- Average time to close issues: 4 months
- Average time to close pull requests: 7 days
- Total issue authors: 8
- Total pull request authors: 1
- Average comments per issue: 4.83
- Average comments per pull request: 0.0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- fulaibaowang (3)
- LoneKnightz (2)
- connorrogerson (2)
- farmohh (1)
- tbrittoborges (1)
- luckyvivi (1)
- duanjunling (1)
- mao223 (1)
Pull Request Authors
- fulaibaowang (2)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- bioconductor 9,724 total
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 5
- Total maintainers: 1
bioconductor.org: DEWSeq
Differential Expressed Windows Based on Negative Binomial Distribution
- Homepage: https://github.com/EMBL-Hentze-group/DEWSeq/
- Documentation: https://bioconductor.org/packages/release/bioc/vignettes/DEWSeq/inst/doc/DEWSeq.pdf
- License: LGPL (>= 3)
-
Latest release: 1.22.0
published about 1 year ago
Rankings
Dependent repos count: 0.0%
Dependent packages count: 0.0%
Average: 25.0%
Downloads: 75.0%
Maintainers (1)
Last synced:
11 months ago