Science Score: 36.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic publication links
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✓Committers with academic emails
1 of 10 committers (10.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (11.9%) to scientific vocabulary
Keywords
Keywords from Contributors
Repository
Conversion between scRNA-seq objects
Basic Info
- Host: GitHub
- Owner: theislab
- License: other
- Language: R
- Default Branch: devel
- Homepage: https://theislab.github.io/zellkonverter/
- Size: 1.96 MB
Statistics
- Stars: 184
- Watchers: 3
- Forks: 31
- Open Issues: 11
- Releases: 10
Topics
Metadata Files
README.md
zellkonverter
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zellkonverter is a small package for converting between SingleCellExperiment objects and alternative objects for storing single-cell RNA-sequencing data (such as AnnData). It is built on top of the basilisk package.
For documentation see please refer to Bioconductor. Development documentation is also available on Bioconductor devel or the pkgdown site.
Installation
zellkonverter can be installed from Bioconductor using the BiocManager package:
r
if (!requireNamespace("BiocManager", quietly=TRUE)) {
install.packages("BiocManager")
}
BiocManager::install("zellkonverter")
Build status
| Source | Checks | Updated |
|:----------------:|:----------------:|:------------:|
| Bioc release | | 
|
| Bioc devel | | 
|
| GitHub actions | | 
Code of Conduct
Please note that the zellkonverter project is released with a Contributor Code of Conduct. By contributing to this project, you agree to abide by its terms.
Contributors
Made with contributors-img.
Owner
- Name: Theis Lab
- Login: theislab
- Kind: organization
- Email: icb.office@helmholtz-muenchen.de
- Location: Munich
- Website: https://www.helmholtz-muenchen.de/icb/
- Repositories: 213
- Profile: https://github.com/theislab
Institute of Computational Biology
GitHub Events
Total
- Create event: 18
- Release event: 2
- Issues event: 26
- Watch event: 31
- Delete event: 9
- Issue comment event: 64
- Push event: 30
- Pull request review event: 2
- Pull request review comment event: 2
- Pull request event: 18
- Fork event: 4
Last Year
- Create event: 18
- Release event: 2
- Issues event: 26
- Watch event: 31
- Delete event: 9
- Issue comment event: 64
- Push event: 30
- Pull request review event: 2
- Pull request review comment event: 2
- Pull request event: 18
- Fork event: 4
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Luke Zappia | l****i | 275 |
| LTLA | i****s@g****m | 46 |
| Robrecht Cannoodt | r****d@g****m | 24 |
| Nitesh Turaga | n****a@g****m | 8 |
| Kevin Rue-Albrecht | k****7@g****m | 2 |
| Jack Kamm | j****m@g****m | 2 |
| J Wokaty | j****y@s****u | 2 |
| J Wokaty | j****y | 2 |
| Hervé Pagès | h****b@g****m | 1 |
| Martin Morgan | M****n@R****g | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 11
- Total pull requests: 7
- Average time to close issues: 7 months
- Average time to close pull requests: about 1 month
- Total issue authors: 10
- Total pull request authors: 5
- Average comments per issue: 2.91
- Average comments per pull request: 2.14
- Merged pull requests: 4
- Bot issues: 0
- Bot pull requests: 2
Past Year
- Issues: 9
- Pull requests: 7
- Average time to close issues: 6 days
- Average time to close pull requests: about 1 month
- Issue authors: 9
- Pull request authors: 5
- Average comments per issue: 1.56
- Average comments per pull request: 2.14
- Merged pull requests: 4
- Bot issues: 0
- Bot pull requests: 2
Top Authors
Issue Authors
- GabrielHoffman (3)
- Marwansha (2)
- lazappi (2)
- zipy124 (2)
- lucas02061 (1)
- JHYSiu (1)
- jiahaoliu-ai1 (1)
- spatts14 (1)
- nillasivakumar (1)
- vjcitn (1)
- viktorzou (1)
- david-priest (1)
- giovp (1)
- ilibarra (1)
- Always-Stude (1)
Pull Request Authors
- dependabot[bot] (6)
- lazappi (4)
- axelalmet (1)
- mcmero (1)
- GabrielHoffman (1)
- liuweihahaha (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 2
-
Total downloads:
- bioconductor 91,900 total
-
Total dependent packages: 6
(may contain duplicates) -
Total dependent repositories: 0
(may contain duplicates) - Total versions: 90
- Total maintainers: 1
proxy.golang.org: github.com/theislab/zellkonverter
- Documentation: https://pkg.go.dev/github.com/theislab/zellkonverter#section-documentation
- License: other
-
Latest release: v1.19.2
published 8 months ago
Rankings
bioconductor.org: zellkonverter
Conversion Between scRNA-seq Objects
- Homepage: https://github.com/theislab/zellkonverter
- Documentation: https://bioconductor.org/packages/release/bioc/vignettes/zellkonverter/inst/doc/zellkonverter.pdf
- License: MIT + file LICENSE
-
Latest release: 1.18.0
published 10 months ago
Rankings
Maintainers (1)
Dependencies
- DelayedArray * imports
- Matrix * imports
- S4Vectors * imports
- SingleCellExperiment >= 1.11.6 imports
- SummarizedExperiment * imports
- basilisk * imports
- cli * imports
- methods * imports
- reticulate * imports
- utils * imports
- BiocFileCache * suggests
- BiocStyle * suggests
- HDF5Array * suggests
- covr * suggests
- knitr * suggests
- rhdf5 * suggests
- rmarkdown * suggests
- scRNAseq * suggests
- spelling * suggests
- testthat * suggests
- JamesIves/github-pages-deploy-action 4.1.4 composite
- actions/checkout v3 composite
- r-lib/actions/check-r-package v2 composite
- r-lib/actions/setup-pandoc v2 composite
- r-lib/actions/setup-r v2 composite
- r-lib/actions/setup-r-dependencies v2 composite