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lemur

Latent Embedding Multivariate Regression

https://github.com/const-ae/lemur

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 3 committers (33.3%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (4.7%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Latent Embedding Multivariate Regression

Basic Info
Statistics
  • Stars: 94
  • Watchers: 5
  • Forks: 7
  • Open Issues: 10
  • Releases: 0
Created over 3 years ago · Last pushed over 1 year ago
Metadata Files
Readme Changelog License

README.Rmd 

---
output: github_document
---



```{r setup, include = FALSE}
if(! exists("..options_set") || isFALSE(..options_set)){
  knitr::opts_chunk$set(
    collapse = TRUE,
    comment = "#>",
    fig.path = "man/figures/README-",
    out.width = "80%",
    fig.asp = 0.5,
    fig.align = "center",
    dpi = 300
  )
  ..options_set <- TRUE
}
```

```{r child = "vignettes/Introduction.qmd"}

```

Owner

  • Name: Constantin
  • Login: const-ae
  • Kind: user
  • Location: Heidelberg, Germany
  • Company: EMBL

PhD Student, Biostats, R

GitHub Events

Total
  • Issues event: 6
  • Watch event: 13
  • Issue comment event: 21
  • Push event: 4
Last Year
  • Issues event: 6
  • Watch event: 13
  • Issue comment event: 21
  • Push event: 4

Committers

Last synced: about 1 year ago

All Time
  • Total Commits: 467
  • Total Committers: 3
  • Avg Commits per committer: 155.667
  • Development Distribution Score (DDS): 0.049
Past Year
  • Commits: 31
  • Committers: 2
  • Avg Commits per committer: 15.5
  • Development Distribution Score (DDS): 0.419
Top Committers
Name Email Commits
const-ae a****5@g****m 444
Wolfgang Huber w****r@e****g 19
J Wokaty j****y 4
Committer Domains (Top 20 + Academic)
embl.org: 1

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 22
  • Total pull requests: 2
  • Average time to close issues: 5 days
  • Average time to close pull requests: less than a minute
  • Total issue authors: 18
  • Total pull request authors: 1
  • Average comments per issue: 3.55
  • Average comments per pull request: 0.0
  • Merged pull requests: 2
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 6
  • Pull requests: 0
  • Average time to close issues: about 17 hours
  • Average time to close pull requests: N/A
  • Issue authors: 6
  • Pull request authors: 0
  • Average comments per issue: 4.17
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • BiotechPedro (4)
  • PedroMilanezAlmeida (2)
  • joschif (1)
  • MaximilianNuber (1)
  • nandobonf (1)
  • Montsecb (1)
  • KidElectric (1)
  • castro019 (1)
  • edg1983 (1)
  • anemartinezlarrinaga2898 (1)
  • xye1813 (1)
  • JLiLab (1)
  • TahneeMa (1)
  • lucafusarbassini (1)
  • chibatoshikaze (1)
Pull Request Authors
  • wolfganghuber (4)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • bioconductor 5,298 total
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 9
  • Total maintainers: 1
bioconductor.org: lemur

Latent Embedding Multivariate Regression

  • Versions: 9
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 5,298 Total
Rankings
Dependent repos count: 0.0%
Stargazers count: 4.0%
Average: 12.6%
Forks count: 14.7%
Dependent packages count: 31.7%
Maintainers (1)
artjom31415@googlemail.com
Last synced: 11 months ago

Dependencies

DESCRIPTION cran
  • R >= 4.1 depends
  • BiocGenerics * imports
  • BiocNeighbors * imports
  • DelayedMatrixStats * imports
  • HDF5Array * imports
  • Matrix * imports
  • MatrixGenerics * imports
  • Rcpp * imports
  • S4Vectors * imports
  • SingleCellExperiment * imports
  • SummarizedExperiment * imports
  • expm * imports
  • glmGamPoi >= 1.11.6 imports
  • harmony * imports
  • irlba * imports
  • limma * imports
  • matrixStats * imports
  • methods * imports
  • rlang * imports
  • vctrs * imports
  • edgeR * suggests
  • testthat >= 3.0.0 suggests