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knowYourCG

https://github.com/zhou-lab/knowyourcg

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Academic email domains
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (6.3%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

Basic Info
  • Host: GitHub
  • Owner: zhou-lab
  • License: mit
  • Language: C
  • Default Branch: devel
  • Size: 90.9 MB
Statistics
  • Stars: 3
  • Watchers: 3
  • Forks: 3
  • Open Issues: 0
  • Releases: 0
Created over 5 years ago · Last pushed about 1 year ago
Metadata Files
Readme Changelog License

README.md

Last Commit CI Status

KnowYourCG (Supervised Learning of Sparse DNA Methylome Data)

Install knowYourCG

Release version can be installed from Bioconductor r BiocManager::install("knowYourCG")

Development version can be installed from github. r BiocManager::install('zhou-lab/knowYourCG')

See also

https://github.com/zhou-lab/YAME

Owner

  • Name: zhou-lab
  • Login: zhou-lab
  • Kind: organization

GitHub Events

Total
  • Watch event: 3
  • Push event: 58
  • Fork event: 1
Last Year
  • Watch event: 3
  • Push event: 58
  • Fork event: 1

Issues and Pull Requests

Last synced: 10 months ago

All Time
  • Total issues: 0
  • Total pull requests: 1
  • Average time to close issues: N/A
  • Average time to close pull requests: 6 days
  • Total issue authors: 0
  • Total pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • ethanmoyer (1)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • bioconductor 4,026 total
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 5
  • Total maintainers: 1
bioconductor.org: knowYourCG

Functional analysis of DNA methylome datasets

  • Versions: 5
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 4,026 Total
Rankings
Dependent repos count: 0.0%
Dependent packages count: 31.3%
Average: 42.9%
Downloads: 97.6%
Maintainers (1)
golddc72@pennmedicine.upenn.edu
Last synced: 10 months ago

Dependencies

DESCRIPTION cran
  • R >= 4.3.0 depends
  • sesameData * depends
  • GenomicRanges * imports
  • IRanges * imports
  • S4Vectors * imports
  • dplyr * imports
  • ggplot2 * imports
  • methods * imports
  • reshape2 * imports
  • stats * imports
  • stringr * imports
  • tibble * imports
  • SummarizedExperiment * suggests
  • ggrepel * suggests
  • knitr * suggests
  • markdown * suggests
  • rmarkdown * suggests
  • testthat >= 3.0.0 suggests