TileDBArray
Clone of the Bioconductor repository for the TileDBArray package.
Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (4.2%) to scientific vocabulary
Keywords from Contributors
Repository
Clone of the Bioconductor repository for the TileDBArray package.
Basic Info
- Host: GitHub
- Owner: LTLA
- License: other
- Language: R
- Default Branch: master
- Homepage: https://bioconductor.org/packages/devel/bioc/html/TileDBArray.html
- Size: 144 KB
Statistics
- Stars: 10
- Watchers: 8
- Forks: 2
- Open Issues: 5
- Releases: 0
Metadata Files
README.md
DelayedArray backends for TileDB
|Build|Status|
|-----|----|
| Bioc-release | 
|
| Bioc-devel | 
|
This package implements DelayedArray backend
for TileDB to read, write and store dense and sparse arrays.
The resulting TileDBArray objects are directly compatible with any Bioconductor package that accepts DelayedArray objects,
serving as a swap-in replacement for the predominant HDF5Array
that is currently used throughout the Bioconductor ecosystem for representing large datasets.
See the official Bioconductor landing page for more details.
Owner
- Name: Aaron Lun
- Login: LTLA
- Kind: user
- Location: San Francisco
- Company: @Genentech
- Twitter: realAaronLun
- Repositories: 183
- Profile: https://github.com/LTLA
It/Its (ノಠ益ಠ)ノ彡┻━┻
GitHub Events
Total
- Watch event: 1
- Push event: 1
- Pull request event: 2
- Fork event: 1
Last Year
- Watch event: 1
- Push event: 1
- Pull request event: 2
- Fork event: 1
Committers
Last synced: over 1 year ago
Top Committers
| Name | Commits | |
|---|---|---|
| LTLA | i****s@g****m | 37 |
| Aaron Lun | l****n@g****m | 28 |
| Dirk Eddelbuettel | e****d@d****g | 14 |
| Nitesh Turaga | n****a@g****m | 8 |
| J Wokaty | j****y | 8 |
| Hervé Pagès | h****s@f****g | 5 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: over 1 year ago
All Time
- Total issues: 10
- Total pull requests: 17
- Average time to close issues: 2 days
- Average time to close pull requests: about 13 hours
- Total issue authors: 6
- Total pull request authors: 2
- Average comments per issue: 6.2
- Average comments per pull request: 1.12
- Merged pull requests: 17
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 0
- Average time to close issues: about 7 hours
- Average time to close pull requests: N/A
- Issue authors: 1
- Pull request authors: 0
- Average comments per issue: 1.0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- LTLA (4)
- kokitsuyuzaki (2)
- eddelbuettel (1)
- tomsing1 (1)
- martin-g (1)
- PedroMilanezAlmeida (1)
Pull Request Authors
- LTLA (11)
- eddelbuettel (6)
- aboyoun (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- bioconductor 8,740 total
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 6
- Total maintainers: 1
bioconductor.org: TileDBArray
Using TileDB as a DelayedArray Backend
- Homepage: https://github.com/LTLA/TileDBArray
- Documentation: https://bioconductor.org/packages/release/bioc/vignettes/TileDBArray/inst/doc/TileDBArray.pdf
- License: MIT + file LICENSE
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Latest release: 1.18.0
published about 1 year ago
Rankings
Maintainers (1)
Dependencies
- DelayedArray >= 0.15.16 depends
- Rcpp * imports
- S4Vectors * imports
- methods * imports
- tiledb * imports
- BiocParallel * suggests
- BiocStyle * suggests
- Matrix * suggests
- knitr * suggests
- rmarkdown * suggests
- testthat * suggests