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BiocFHIR

Illustration of FHIR V4 Processing with synthea data

https://github.com/vjcitn/biocfhir

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    2 of 2 committers (100.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (5.5%) to scientific vocabulary

Keywords

fhir

Keywords from Contributors

bioconductor-package
Last synced: 11 months ago · JSON representation

Repository

Illustration of FHIR V4 Processing with synthea data

Basic Info
Statistics
  • Stars: 4
  • Watchers: 3
  • Forks: 1
  • Open Issues: 0
  • Releases: 0
Topics
fhir
Created almost 4 years ago · Last pushed over 2 years ago
Metadata Files
Readme

README.md

unit-pass.svg date.svg anvil-container.svg

BiocFHIR

Illustration of FHIR V4 Processing with synthea data

This R package addresses very basic tasks of parsing FHIR R4 documents in JSON format.

We will work through elements of the following concept map:

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Use in AnVIL

In a terra workspace

  • use an Rstudio cloud environment
  • start a git project
  • use https://github.com/vjcitn/BiocFHIR as the repository
  • in the Rstudio console
    • use BiocManager::install("vjcitn/BiocFHIR") to get the software
    • navigate to the vignettes folder and knit the Rmd file to HTML

Owner

  • Name: Vince Carey
  • Login: vjcitn
  • Kind: user
  • Location: Boston

GitHub Events

Total
Last Year

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 62
  • Total Committers: 2
  • Avg Commits per committer: 31.0
  • Development Distribution Score (DDS): 0.032
Past Year
  • Commits: 7
  • Committers: 2
  • Avg Commits per committer: 3.5
  • Development Distribution Score (DDS): 0.286
Top Committers
Name Email Commits
Vince Carey s****c@c****u 60
J Wokaty j****y@s****u 2
Committer Domains (Top 20 + Academic)
sph.cuny.edu: 1 channing.harvard.edu: 1

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 0
  • Total pull requests: 10
  • Average time to close issues: N/A
  • Average time to close pull requests: 11 minutes
  • Total issue authors: 0
  • Total pull request authors: 2
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 10
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • almahmoud (7)
  • vjcitn (5)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • bioconductor 5,444 total
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 5
  • Total maintainers: 1
bioconductor.org: BiocFHIR

Illustration of FHIR ingestion and transformation using R

  • Versions: 5
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 5,444 Total
Rankings
Dependent repos count: 0.0%
Dependent packages count: 0.0%
Forks count: 19.8%
Stargazers count: 24.9%
Average: 27.4%
Downloads: 92.4%
Maintainers (1)
stvjc@channing.harvard.edu
Last synced: 11 months ago