Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (7.5%) to scientific vocabulary
Keywords
Keywords from Contributors
Repository
mimager: The microarray imager
Basic Info
Statistics
- Stars: 0
- Watchers: 3
- Forks: 0
- Open Issues: 0
- Releases: 0
Topics
Metadata Files
README.md
mimager: The Microarray Imager
mimager simplifies the process of imaging microarrays and inspecting them for spatial artifacts by providing a consistent visualization interface that supports many of Bioconductor's microarray object classes.
Installation
You can install the latest release from Bioconductor:
r
if (!requireNamespace("BiocManager", quietly=TRUE))
install.packages("BiocManager")
BiocManager::install("mimager")
or the current development version using devtools:
```r
library(devtools)
installgithub("aaronwolen/mimager", buildvignettes = TRUE) ```
Example
```r library(mimager) library(affydata) data("Dilution")
mimage(Dilution, transform = arle, nrows = 1, legend.label = "RLE") ```
Owner
- Name: Aaron Wolen
- Login: aaronwolen
- Kind: user
- Company: @TileDB-Inc
- Website: www.aaronwolen.com
- Twitter: aaronwolen
- Repositories: 40
- Profile: https://github.com/aaronwolen
GitHub Events
Total
Last Year
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Aaron Wolen | a****n@w****m | 175 |
| Nitesh Turaga | n****a@g****m | 4 |
| Hervé Pagès | h****s@f****g | 2 |
| vobencha | v****a@g****m | 2 |
| vobencha | v****n@r****g | 2 |
| Herve Pages | h****s@f****g | 2 |
| LiNk-NY | m****z@r****g | 1 |
| LiNk-NY | m****9@g****m | 1 |
| lshep | s****l@g****m | 1 |
| mtmorgan@fhcrc.org | m****n@f****g@b****8 | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 12 months ago
All Time
- Total issues: 16
- Total pull requests: 5
- Average time to close issues: 13 days
- Average time to close pull requests: 1 minute
- Total issue authors: 1
- Total pull request authors: 1
- Average comments per issue: 0.38
- Average comments per pull request: 0.0
- Merged pull requests: 4
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- aaronwolen (16)
Pull Request Authors
- aaronwolen (5)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- bioconductor 13,810 total
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 5
- Total maintainers: 1
bioconductor.org: mimager
mimager: The Microarray Imager
- Homepage: https://github.com/aaronwolen/mimager
- Documentation: https://bioconductor.org/packages/release/bioc/vignettes/mimager/inst/doc/mimager.pdf
- License: MIT + file LICENSE
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Latest release: 1.32.0
published 10 months ago
Rankings
Maintainers (1)
Dependencies
- Biobase * depends
- BiocGenerics * imports
- DBI * imports
- S4Vectors * imports
- affy * imports
- affyPLM * imports
- grDevices * imports
- grid * imports
- gtable * imports
- methods * imports
- oligo * imports
- oligoClasses * imports
- preprocessCore * imports
- scales * imports
- BiocStyle * suggests
- Matrix * suggests
- abind * suggests
- affydata * suggests
- hgu95av2cdf * suggests
- knitr * suggests
- lintr >= 2.0 suggests
- oligoData * suggests
- pd.hugene.1.0.st.v1 * suggests
- rmarkdown * suggests
- testthat * suggests