ExperimentHub
Client to access ExperimentHub resources
Science Score: 36.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
✓.zenodo.json file
Found .zenodo.json file -
○DOI references
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○Academic links in README
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✓Committers with academic emails
3 of 25 committers (12.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (0.7%) to scientific vocabulary
Keywords
core-package
u24ca289073
Keywords from Contributors
bioconductor-packages
bioconductor
bioinformatics
rnaseq
deseq2
derfinder
mutations
data-structure
copynumber
rhdf5
Last synced: 6 months ago
·
JSON representation
Repository
Client to access ExperimentHub resources
Basic Info
- Host: GitHub
- Owner: Bioconductor
- Language: R
- Default Branch: devel
- Homepage: https://bioconductor.org/packages/ExperimentHub
- Size: 271 KB
Statistics
- Stars: 11
- Watchers: 7
- Forks: 14
- Open Issues: 5
- Releases: 0
Topics
core-package
u24ca289073
Created over 8 years ago
· Last pushed 7 months ago
Metadata Files
Changelog
Owner
- Name: Bioconductor
- Login: Bioconductor
- Kind: organization
- Website: https://bioconductor.org
- Repositories: 156
- Profile: https://github.com/Bioconductor
Software for the analysis and comprehension of high-throughput genomic data
GitHub Events
Total
- Issues event: 8
- Watch event: 2
- Delete event: 4
- Issue comment event: 34
- Push event: 8
- Pull request review event: 3
- Pull request review comment event: 2
- Pull request event: 5
- Fork event: 1
- Create event: 3
Last Year
- Issues event: 8
- Watch event: 2
- Delete event: 4
- Issue comment event: 34
- Push event: 8
- Pull request review event: 3
- Pull request review comment event: 2
- Pull request event: 5
- Fork event: 1
- Create event: 3
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| lshep | l****d@r****g | 48 |
| Valerie Obenchain | v****a@f****g | 19 |
| lshep | s****l@g****m | 17 |
| Nitesh Turaga | n****a@g****m | 14 |
| Martin Morgan | m****n@f****g | 7 |
| Kayla-Morrell | k****l@r****g | 7 |
| Hervé Pagès | h****b@g****m | 5 |
| Dan Tenenbaum | d****a@f****g | 5 |
| J Wokaty | j****y@s****u | 4 |
| Herve Pages | h****s@f****g | 4 |
| LiNk-NY | m****z@r****g | 4 |
| vobencha | v****n@r****g | 3 |
| Chandler Zuo | z****o@s****u | 2 |
| J Wokaty | j****y | 2 |
| Hervé Pagès | h****s@f****g | 2 |
| vobencha | v****a@g****m | 2 |
| Martin Morgan | M****n@R****g | 1 |
| Martin Morgan | m****n@r****g | 1 |
| Federico Marini | m****f@u****e | 1 |
| Levi Waldron | l****h@g****m | 1 |
| Milan Malfait | m****4@g****m | 1 |
| Peter Hickey | p****y@g****m | 1 |
| kjohnsen | j****3@g****m | 1 |
| Mike Love | m****e | 1 |
| LTLA | i****s@g****m | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 31
- Total pull requests: 17
- Average time to close issues: 3 months
- Average time to close pull requests: 3 days
- Total issue authors: 25
- Total pull request authors: 12
- Average comments per issue: 3.97
- Average comments per pull request: 0.71
- Merged pull requests: 14
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 3
- Pull requests: 3
- Average time to close issues: about 24 hours
- Average time to close pull requests: 1 day
- Issue authors: 3
- Pull request authors: 2
- Average comments per issue: 2.67
- Average comments per pull request: 0.0
- Merged pull requests: 1
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- LiNk-NY (4)
- vjcitn (3)
- hpages (2)
- kazaguls (1)
- delocalizer (1)
- aciolfi (1)
- aadamk (1)
- LDHHAHA (1)
- jwokaty (1)
- xingrenUB (1)
- DongqiangZeng0808 (1)
- cying111 (1)
- lshep (1)
- yyang-SDI (1)
- chrisclarkson (1)
Pull Request Authors
- lshep (3)
- LiNk-NY (3)
- LTLA (2)
- votti (2)
- hpages (2)
- lwaldron (1)
- PeteHaitch (1)
- mtmorgan (1)
- federicomarini (1)
- milanmlft (1)
- mikelove (1)
- kjohnsen (1)
Top Labels
Issue Labels
question (2)
enhancement (1)
bug (1)
Pull Request Labels
Packages
- Total packages: 1
-
Total downloads:
- bioconductor 615,511 total
- Total dependent packages: 61
- Total dependent repositories: 0
- Total versions: 6
- Total maintainers: 1
bioconductor.org: ExperimentHub
Client to access ExperimentHub resources
- Homepage: https://github.com/Bioconductor/ExperimentHub
- Documentation: https://bioconductor.org/packages/release/bioc/vignettes/ExperimentHub/inst/doc/ExperimentHub.pdf
- License: Artistic-2.0
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Latest release: 2.16.1
published 7 months ago
Rankings
Dependent repos count: 0.0%
Dependent packages count: 1.4%
Downloads: 4.5%
Average: 6.2%
Forks count: 7.0%
Stargazers count: 18.1%
Maintainers (1)
Last synced:
6 months ago
Dependencies
DESCRIPTION
cran
- AnnotationHub >= 3.3.6 depends
- BiocFileCache >= 1.5.1 depends
- BiocGenerics >= 0.15.10 depends
- methods * depends
- ExperimentHubData * enhances
- BiocManager * imports
- S4Vectors * imports
- curl * imports
- rappdirs * imports
- utils * imports
- BiocStyle * suggests
- HubPub * suggests
- knitr * suggests
- rmarkdown * suggests