DelayedDataFrame

Delayed operation on DataFrame

https://github.com/bioconductor/delayeddataframe

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
    2 of 6 committers (33.3%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (1.4%) to scientific vocabulary

Keywords from Contributors

bioconductor-package bioconductor bioinformatics core-package proteomics mass-spectrometry limma normalization bioc rnaseq
Last synced: 11 months ago · JSON representation

Repository

Delayed operation on DataFrame

Basic Info
  • Host: GitHub
  • Owner: Bioconductor
  • Language: HTML
  • Default Branch: devel
  • Size: 567 KB
Statistics
  • Stars: 2
  • Watchers: 9
  • Forks: 0
  • Open Issues: 1
  • Releases: 0
Created about 8 years ago · Last pushed over 1 year ago
Metadata Files
Readme Changelog

README.md

DelayedDataFrame

Based on the standard DataFrame metaphor, we are trying to implement the feature of delayed operation on the DelayedDataFrame, with a slot of lazyIndex, which saves the mapping indexes for each column of DelayedDataFrame. Methods like show, validity check, [/[[ subsetting, rbind/cbind are implemented for DelayedDataFrame to be operated around lazyIndex. The listData slot stays untouched until a realization call e.g., DataFrame constructor OR as.list() incurred.

Owner

  • Name: Bioconductor
  • Login: Bioconductor
  • Kind: organization

Software for the analysis and comprehension of high-throughput genomic data

GitHub Events

Total
  • Push event: 2
  • Create event: 2
Last Year
  • Push event: 2
  • Create event: 2

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 52
  • Total Committers: 6
  • Avg Commits per committer: 8.667
  • Development Distribution Score (DDS): 0.462
Past Year
  • Commits: 7
  • Committers: 3
  • Avg Commits per committer: 2.333
  • Development Distribution Score (DDS): 0.429
Top Committers
Name Email Commits
Qian Liu q****7@b****u 28
Nitesh Turaga n****a@g****m 14
J Wokaty j****y@s****u 4
Hervé Pagès h****s@f****g 3
J Wokaty j****y 2
Hervé Pagès h****b@g****m 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 1
  • Total pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Total issue authors: 1
  • Total pull request authors: 0
  • Average comments per issue: 0.0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • Liubuntu (1)
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • bioconductor 10,458 total
  • Total dependent packages: 1
  • Total dependent repositories: 0
  • Total versions: 5
  • Total maintainers: 1
bioconductor.org: DelayedDataFrame

Delayed operation on DataFrame using standard DataFrame metaphor

  • Versions: 5
  • Dependent Packages: 1
  • Dependent Repositories: 0
  • Downloads: 10,458 Total
Rankings
Dependent repos count: 0.0%
Dependent packages count: 0.0%
Average: 24.4%
Downloads: 73.3%
Maintainers (1)
Last synced: 11 months ago

Dependencies

DESCRIPTION cran
  • DelayedArray >= 0.7.5 depends
  • R >= 3.6 depends
  • S4Vectors >= 0.23.19 depends
  • BiocGenerics * imports
  • methods * imports
  • stats * imports
  • GDSArray * suggests
  • SeqArray * suggests
  • knitr * suggests
  • rmarkdown * suggests
  • testthat * suggests