Data

Tools

Indexes

Applications

Experiments

Open Source Science

iSEEde

iSEE extension for panels related to differential expression analysis

https://github.com/isee/iseede

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic links in README
  • ✓
    Committers with academic emails
    1 of 4 committers (25.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (0.4%) to scientific vocabulary

Keywords

bioconductor hacktoberfest iseeu

Keywords from Contributors

bioconductor-package genomics
Last synced: 6 months ago · JSON representation

Repository

iSEE extension for panels related to differential expression analysis

Basic Info
Statistics
  • Stars: 1
  • Watchers: 4
  • Forks: 1
  • Open Issues: 5
  • Releases: 0
Topics
bioconductor hacktoberfest iseeu
Created about 3 years ago · Last pushed over 1 year ago
Metadata Files
Readme Changelog Contributing Code of conduct Support

Owner

  • Name: iSEE everything
  • Login: iSEE
  • Kind: organization

GitHub Events

Total
  • Issues event: 2
  • Delete event: 2
  • Issue comment event: 8
  • Push event: 6
  • Pull request event: 4
  • Create event: 2
Last Year
  • Issues event: 2
  • Delete event: 2
  • Issue comment event: 8
  • Push event: 6
  • Pull request event: 4
  • Create event: 2

Committers

Last synced: 6 months ago

All Time
  • Total Commits: 40
  • Total Committers: 4
  • Avg Commits per committer: 10.0
  • Development Distribution Score (DDS): 0.175
Past Year
  • Commits: 7
  • Committers: 2
  • Avg Commits per committer: 3.5
  • Development Distribution Score (DDS): 0.286
Top Committers
Name Email Commits
Kevin Rue-Albrecht k****7@g****m 33
J Wokaty j****y@s****u 4
J Wokaty j****y@u****m 2
Thomas Sandmann t****1@u****m 1
Committer Domains (Top 20 + Academic)
sph.cuny.edu: 1

Issues and Pull Requests

Last synced: over 1 year ago

All Time
  • Total issues: 9
  • Total pull requests: 28
  • Average time to close issues: about 1 month
  • Average time to close pull requests: about 2 hours
  • Total issue authors: 3
  • Total pull request authors: 2
  • Average comments per issue: 2.44
  • Average comments per pull request: 0.14
  • Merged pull requests: 28
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 3
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 2
  • Pull request authors: 0
  • Average comments per issue: 0.67
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • kevinrue (6)
  • tomsing1 (3)
Pull Request Authors
  • kevinrue (30)
  • tomsing1 (1)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • bioconductor 4,891 total
  • Total dependent packages: 1
  • Total dependent repositories: 0
  • Total versions: 4
  • Total maintainers: 1
bioconductor.org: iSEEde

iSEE extension for panels related to differential expression analysis

  • Versions: 4
  • Dependent Packages: 1
  • Dependent Repositories: 0
  • Downloads: 4,891 Total
Rankings
Dependent repos count: 0.0%
Forks count: 22.4%
Dependent packages count: 31.7%
Stargazers count: 36.9%
Average: 37.7%
Downloads: 97.5%
Maintainers (1)
kevinrue67@gmail.com
Last synced: 6 months ago

Dependencies

.github/workflows/check-bioc.yml actions
  • actions/cache v3 composite
  • actions/checkout v3 composite
  • actions/upload-artifact master composite
  • docker/build-push-action v1 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
DESCRIPTION cran
  • iSEE * depends
  • DESeq2 * imports
  • S4Vectors * imports
  • SummarizedExperiment * imports
  • edgeR * imports
  • methods * imports
  • shiny * imports
  • BiocStyle * suggests
  • RefManageR * suggests
  • airway * suggests
  • covr * suggests
  • knitr * suggests
  • limma * suggests
  • org.Hs.eg.db * suggests
  • rmarkdown * suggests
  • scuttle * suggests
  • sessioninfo * suggests
  • statmod * suggests
  • testthat >= 3.0.0 suggests