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BiocStyle

Issues and pull requests for BiocStyle should go here.

https://github.com/bioconductor/biocstyle

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic links in README
  • ✓
    Committers with academic emails
    4 of 21 committers (19.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (1.3%) to scientific vocabulary

Keywords

bioconductor-package core-package

Keywords from Contributors

genomics bioconductor bioinformatics gene u24ca289073 rhdf5 hdf5 image-analysis core-services human-cell-atlas
Last synced: 6 months ago · JSON representation

Repository

Issues and pull requests for BiocStyle should go here.

Basic Info
  • Host: GitHub
  • Owner: Bioconductor
  • Language: R
  • Default Branch: devel
  • Homepage:
  • Size: 584 KB
Statistics
  • Stars: 13
  • Watchers: 17
  • Forks: 20
  • Open Issues: 36
  • Releases: 0
Topics
bioconductor-package core-package
Created over 10 years ago · Last pushed 6 months ago
Metadata Files
Changelog

Owner

  • Name: Bioconductor
  • Login: Bioconductor
  • Kind: organization

Software for the analysis and comprehension of high-throughput genomic data

GitHub Events

Total
  • Issues event: 2
  • Watch event: 1
  • Member event: 1
  • Issue comment event: 13
  • Push event: 13
  • Pull request event: 2
  • Fork event: 1
  • Create event: 4
Last Year
  • Issues event: 2
  • Watch event: 1
  • Member event: 1
  • Issue comment event: 13
  • Push event: 13
  • Pull request event: 2
  • Fork event: 1
  • Create event: 4

Committers

Last synced: 9 months ago

All Time
  • Total Commits: 433
  • Total Committers: 21
  • Avg Commits per committer: 20.619
  • Development Distribution Score (DDS): 0.513
Past Year
  • Commits: 6
  • Committers: 4
  • Avg Commits per committer: 1.5
  • Development Distribution Score (DDS): 0.667
Top Committers
Name Email Commits
Andrzej Oleś a****s@g****m 211
Mike Smith g****h@g****m 103
Martin Morgan m****n@f****g 31
Dan Tenenbaum d****a@f****g 18
Nitesh Turaga n****a@g****m 14
J Wokaty j****y@s****u 10
Aaron Lun a****n@c****k 8
Wolfgang Huber w****r@d****e 6
LTLA i****s@g****m 5
Martin Morgan m****n@r****g 4
Herve Pages h****s@f****g 4
Hervé Pagès h****s@f****g 3
LiNk-NY m****z@r****g 3
Felix Ernst f****t@u****e 2
vobencha v****a@g****m 2
vobencha v****n@r****g 2
Kasper D. Hansen k****n@s****u 2
A Wokaty a****y@s****u 2
Kayla-Morrell 3****l 1
Kevin Rue-Albrecht k****7@g****m 1
Markus Hsi-Yang Fritz m****z@g****m 1
Committer Domains (Top 20 + Academic)
roswellpark.org: 3 fhcrc.org: 3 sph.cuny.edu: 2 stat.berkeley.edu: 1 ulb.ac.be: 1 fredhutch.org: 1 dkfz-heidelberg.de: 1 cruk.cam.ac.uk: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 86
  • Total pull requests: 21
  • Average time to close issues: 4 months
  • Average time to close pull requests: 5 months
  • Total issue authors: 42
  • Total pull request authors: 12
  • Average comments per issue: 3.69
  • Average comments per pull request: 3.05
  • Merged pull requests: 15
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 3
  • Pull requests: 1
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 3
  • Pull request authors: 1
  • Average comments per issue: 2.33
  • Average comments per pull request: 0.0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • LTLA (9)
  • aoles (8)
  • hpages (5)
  • lgatto (5)
  • mtmorgan (5)
  • lcolladotor (4)
  • rdiaz02 (4)
  • llrs (3)
  • FelixErnst (3)
  • grimbough (3)
  • LiNk-NY (3)
  • witszymanski (2)
  • federicomarini (2)
  • vjcitn (2)
  • kevinrue (1)
Pull Request Authors
  • grimbough (8)
  • LTLA (3)
  • zeehio (2)
  • LiNk-NY (2)
  • federicomarini (2)
  • DrGrimshaw (1)
  • mhyfritz (1)
  • mtmorgan (1)
  • schifferl (1)
  • Kayla-Morrell (1)
  • FelixErnst (1)
  • kevinrue (1)
Top Labels
Issue Labels
bug (7) enhancement (4) urgent (1)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • bioconductor 898,621 total
  • Total dependent packages: 1,298
  • Total dependent repositories: 0
  • Total versions: 6
  • Total maintainers: 1
bioconductor.org: BiocStyle

Standard styles for vignettes and other Bioconductor documents

  • Versions: 6
  • Dependent Packages: 1,298
  • Dependent Repositories: 0
  • Downloads: 898,621 Total
Rankings
Dependent repos count: 0.0%
Dependent packages count: 0.0%
Downloads: 3.2%
Forks count: 3.4%
Average: 3.8%
Stargazers count: 12.5%
Maintainers (1)
maintainer@bioconductor.org
Last synced: 6 months ago

Dependencies

DESCRIPTION cran
  • BiocManager * imports
  • bookdown * imports
  • knitr >= 1.30 imports
  • rmarkdown >= 1.2 imports
  • stats * imports
  • utils * imports
  • yaml * imports
  • BiocGenerics * suggests
  • RUnit * suggests
  • htmltools * suggests
.github/workflows/test-pandoc-versions.yml actions
  • actions/checkout v2 composite
  • actions/upload-artifact v3 composite
  • grimbough/bioc-actions/build-install-check devel composite
  • grimbough/bioc-actions/setup-bioc v1 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
  • r-lib/actions/setup-tinytex v2 composite