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reda

Recurrent Event Data Analysis

https://github.com/wenjie2wang/reda

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 6 committers (16.7%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (11.9%) to scientific vocabulary

Keywords

mcf mean-cumulative-function r recurrent-event survival-analysis
Last synced: 10 months ago · JSON representation

Repository

Recurrent Event Data Analysis

Basic Info
  • Host: GitHub
  • Owner: wenjie2wang
  • License: gpl-3.0
  • Language: R
  • Default Branch: main
  • Homepage: https://wwenjie.org/reda
  • Size: 4.44 MB
Statistics
  • Stars: 17
  • Watchers: 5
  • Forks: 7
  • Open Issues: 0
  • Releases: 12
Topics
mcf mean-cumulative-function r recurrent-event survival-analysis
Created almost 11 years ago · Last pushed 10 months ago
Metadata Files
Readme Changelog License

README.md

reda

CRAN_Status_Badge Build Status codecov

Overview

The R package reda provides functions for

  • simulating survival, recurrent event, and multiple event data from stochastic process point of view;
  • exploring and modeling recurrent event data through the mean cumulative function (MCF) by the Nelson-Aalen estimator of the cumulative hazard rate function, and gamma frailty model with spline rate function;
  • comparing two-sample recurrent event responses with the pseudo-score tests.

Installation of CRAN Version

You can install the released version from CRAN.

R install.packages("reda")

Development

The latest version of the package is under development at GitHub. If it is able to pass the automated package checks, one may install it by

R if (! require(remotes)) install.packages("remotes") remotes::install_github("wenjie2wang/reda", upgrade = "never")

Getting Started

Online documentation provides function documentations and includes package vignettes for

License

GNU General Public License (≥ 3)

Owner

  • Name: Wenjie Wang
  • Login: wenjie2wang
  • Kind: user
  • Location: Indianapolis, IN
  • Company: @EliLillyCo

GitHub Events

Total
  • Release event: 1
  • Issues event: 2
  • Watch event: 4
  • Issue comment event: 2
  • Push event: 6
Last Year
  • Release event: 1
  • Issues event: 2
  • Watch event: 4
  • Issue comment event: 2
  • Push event: 6

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 533
  • Total Committers: 6
  • Avg Commits per committer: 88.833
  • Development Distribution Score (DDS): 0.255
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Wenjie Wang w****g@u****u 397
Wenjie Wang w****t@g****m 95
Wenjie Wang w****g@w****g 30
Steven Chiou s****u@g****m 6
Wenjie Wang w****e@l****m 3
Jun Yan j****t@g****m 2
Committer Domains (Top 20 + Academic)
lilly.com: 1 wwenjie.org: 1 uconn.edu: 1

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 6
  • Total pull requests: 4
  • Average time to close issues: 6 days
  • Average time to close pull requests: about 15 hours
  • Total issue authors: 5
  • Total pull request authors: 3
  • Average comments per issue: 1.83
  • Average comments per pull request: 2.0
  • Merged pull requests: 3
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 1
  • Pull requests: 0
  • Average time to close issues: 1 day
  • Average time to close pull requests: N/A
  • Issue authors: 1
  • Pull request authors: 0
  • Average comments per issue: 2.0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • wenjie2wang (2)
  • teunbrand (1)
  • tobiasmuetze (1)
  • youna22 (1)
  • zhaoxb10 (1)
Pull Request Authors
  • muschellij2 (2)
  • stc04003 (2)
  • wenjie2wang (1)
Top Labels
Issue Labels
question (2)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 535 last-month
  • Total docker downloads: 21,777
  • Total dependent packages: 2
  • Total dependent repositories: 2
  • Total versions: 12
  • Total maintainers: 1
cran.r-project.org: reda

Recurrent Event Data Analysis

  • Versions: 12
  • Dependent Packages: 2
  • Dependent Repositories: 2
  • Downloads: 535 Last month
  • Docker Downloads: 21,777
Rankings
Forks count: 9.6%
Docker downloads count: 12.6%
Stargazers count: 15.1%
Average: 16.8%
Dependent packages count: 18.1%
Dependent repos count: 19.3%
Downloads: 26.2%
Maintainers (1)
wang@wwenjie.org
Last synced: 10 months ago

Dependencies

DESCRIPTION cran
  • R >= 3.2.3 depends
  • Rcpp * imports
  • ggplot2 * imports
  • grDevices * imports
  • graphics * imports
  • methods * imports
  • splines2 >= 0.4.3 imports
  • stats * imports
  • knitr * suggests
  • rmarkdown * suggests
  • tinytest * suggests
.github/workflows/R-CMD-check.yaml actions
  • actions/checkout v2 composite
  • r-lib/actions/check-r-package v2 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/test-coverage.yaml actions
  • actions/checkout v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite