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natmanager

Streamlined installation of natverse packages

https://github.com/natverse/natmanager

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ✓
    .zenodo.json file
    Found .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ○
    Committers with academic emails
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (15.3%) to scientific vocabulary
Last synced: 11 months ago · JSON representation

Repository

Streamlined installation of natverse packages

Basic Info
Statistics
  • Stars: 4
  • Watchers: 3
  • Forks: 0
  • Open Issues: 0
  • Releases: 6
Created over 6 years ago · Last pushed 11 months ago
Metadata Files
Readme Changelog

README.Rmd 

---
output: github_document
---



```{r, include = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/README-",
  out.width = "100%"
)
```

# natmanager


[![natmanager](https://img.shields.io/badge/natmanager-Part%20of%20the%20natverse-a241b6)](https://natverse.org/)
[![CRAN](https://img.shields.io/cran/v/natmanager)](https://cran.r-project.org/package=natmanager)
![CRAN Downloads](https://cranlogs.r-pkg.org/badges/grand-total/natmanager)
[![GitHub](https://img.shields.io/github/v/release/natverse/natmanager)](https://github.com/natverse/natmanager/releases/)
[![Docs](https://img.shields.io/badge/docs-100%25-brightgreen.svg)](https://natverse.org//natmanager/reference/)
[![R-CMD-check](https://github.com/natverse/natmanager/workflows/R-CMD-check/badge.svg)](https://github.com/natverse/natmanager/actions)
[![codecov](https://codecov.io/gh/natverse/natmanager/branch/master/graph/badge.svg?token=jgs2AqL3xP)](https://app.codecov.io/gh/natverse/natmanager)


The goal of natmanager is to streamline installation of packages from the 
natverse (NeuroAnatomy Toolbox) suite of R packages for computational neuroanatomy. See https://natverse.org/install/ for the full details.

```{r eval=FALSE, include=TRUE}
install.packages('natmanager')

# install core packages to try out the core natverse
natmanager::install('core')

# Full "batteries included" installation with all packages
# It is recommended to have a GitHub account and personal access token (PAT) for this full
# batteries installation. However if you don't have one, then natmanager's default PAT will be used.
natmanager::install('natverse')

#you can also install non-natverse packages like below, this feature is useful if you want to avoid
#rate limiting issues from github and errors from warnings while installing packages:
natmanager::install(pkgs = 'flyconnectome/hemibrainr')
```

Owner

  • Name: natverse
  • Login: natverse
  • Kind: organization

R tools for quantitative neuroanatomy

GitHub Events

Total
  • Watch event: 1
  • Push event: 5
  • Create event: 1
Last Year
  • Watch event: 1
  • Push event: 5
  • Create event: 1

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 331
  • Total Committers: 2
  • Avg Commits per committer: 165.5
  • Development Distribution Score (DDS): 0.369
Past Year
  • Commits: 42
  • Committers: 1
  • Avg Commits per committer: 42.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Sri j****n@g****m 209
Gregory Jefferis j****s@g****m 122

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 12
  • Total pull requests: 9
  • Average time to close issues: 20 days
  • Average time to close pull requests: 7 days
  • Total issue authors: 6
  • Total pull request authors: 2
  • Average comments per issue: 2.67
  • Average comments per pull request: 0.44
  • Merged pull requests: 8
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • jefferis (4)
  • SridharJagannathan (4)
  • tatsuookubo (1)
  • artxz (1)
  • dempseyg447 (1)
  • mmc46 (1)
Pull Request Authors
  • jefferis (5)
  • SridharJagannathan (4)
Top Labels
Issue Labels
duplicate (1)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 346 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 9
  • Total maintainers: 1
cran.r-project.org: natmanager

Install the 'Natverse' Packages from Scratch

  • Versions: 9
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 346 Last month
Rankings
Stargazers count: 28.5%
Forks count: 28.8%
Dependent packages count: 29.8%
Average: 32.1%
Dependent repos count: 35.5%
Downloads: 37.8%
Maintainers (1)
jefferis@gmail.com
Last synced: 11 months ago

Dependencies

DESCRIPTION cran
  • curl * imports
  • gh >= 1.2.1 imports
  • remotes * imports
  • usethis >= 2.0.0 imports
  • utils * imports
  • withr * imports
  • covr * suggests
  • knitr * suggests
  • mockery * suggests
  • rstudioapi * suggests
  • spelling * suggests
  • testthat >= 2.1.0 suggests
.github/workflows/R-CMD-check.yaml actions
  • actions/checkout v3 composite
  • actions/upload-artifact main composite
  • r-lib/actions/check-r-package v2 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/natverse-weekly.yaml actions
  • actions/checkout v3 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/pkgdown.yaml actions
  • JamesIves/github-pages-deploy-action v4.4.1 composite
  • actions/checkout v3 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite