bigutilsr

R package with utility functions for large-scale data

https://github.com/privefl/bigutilsr

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (7.4%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

R package with utility functions for large-scale data

Basic Info
Statistics
  • Stars: 10
  • Watchers: 4
  • Forks: 3
  • Open Issues: 3
  • Releases: 0
Created almost 7 years ago · Last pushed 12 months ago
Metadata Files
Readme

README.md

R-CMD-check Codecov test coverage CRAN status <!-- badges: end -->

bigutilsr

R package with utility functions for large-scale data.

For now, package {bigutilsr} mainly includes functions for outlier detection and unbiased PCA projection.

See this blog post on detecting outlier samples in PCA using functions from {bigutilsr}.

Installation

```r

from CRAN

install.packages("bigutilsr")

latest version from GitHub

remotes::install_github("privefl/bigutilsr") ```

Owner

  • Name: Florian Privé
  • Login: privefl
  • Kind: user
  • Location: Aarhus, Denmark // Lyon, France
  • Company: National Center for Register-based Research (NCRR)

Senior Researcher (2022-) • Postdoc (2019-2021) • PhD student (2016-2019) in predictive human genetics • ENSIMAG (2013-2016)

GitHub Events

Total
  • Push event: 4
Last Year
  • Push event: 4

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 85
  • Total Committers: 1
  • Avg Commits per committer: 85.0
  • Development Distribution Score (DDS): 0.0
Past Year
  • Commits: 7
  • Committers: 1
  • Avg Commits per committer: 7.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Florian Privé f****1@g****m 85

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 9
  • Total pull requests: 0
  • Average time to close issues: 5 months
  • Average time to close pull requests: N/A
  • Total issue authors: 4
  • Total pull request authors: 0
  • Average comments per issue: 2.11
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • privefl (5)
  • schonhose (2)
  • DominiqueMakowski (1)
  • aydaraliev (1)
Pull Request Authors
Top Labels
Issue Labels
help wanted (3) question (1) enhancement (1) documentation (1)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 3,881 last-month
  • Total docker downloads: 1,655
  • Total dependent packages: 3
  • Total dependent repositories: 8
  • Total versions: 7
  • Total maintainers: 1
cran.r-project.org: bigutilsr

Utility Functions for Large-scale Data

  • Versions: 7
  • Dependent Packages: 3
  • Dependent Repositories: 8
  • Downloads: 3,881 Last month
  • Docker Downloads: 1,655
Rankings
Downloads: 6.9%
Dependent repos count: 10.5%
Dependent packages count: 10.9%
Average: 12.6%
Forks count: 14.2%
Stargazers count: 16.5%
Docker downloads count: 16.5%
Maintainers (1)
Last synced: 11 months ago

Dependencies

DESCRIPTION cran
  • RSpectra * imports
  • Rcpp * imports
  • bigassertr >= 0.1.1 imports
  • bigparallelr >= 0.2.3 imports
  • nabor * imports
  • robustbase * imports
  • stats * imports
  • Gmedian * suggests
  • covr * suggests
  • mvtnorm * suggests
  • rrcov * suggests
  • spelling * suggests
  • testthat >= 2.1.0 suggests
.github/workflows/R-CMD-check.yaml actions
  • actions/checkout v3 composite
  • r-lib/actions/check-r-package v2 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/test-coverage.yaml actions
  • actions/checkout v3 composite
  • actions/upload-artifact v3 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite