gge

GGE & GGB biplots

https://github.com/kwstat/gge

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (8.0%) to scientific vocabulary

Keywords

rstats
Last synced: 11 months ago · JSON representation

Repository

GGE & GGB biplots

Basic Info
Statistics
  • Stars: 7
  • Watchers: 3
  • Forks: 2
  • Open Issues: 3
  • Releases: 0
Topics
rstats
Created over 10 years ago · Last pushed almost 2 years ago
Metadata Files
Readme Changelog License

README.md

gge

CRAN_Status_Badge CRAN_Downloads

Homepage: https://kwstat.github.io/gge

Repository: https://github.com/kwstat/gge

Functions for GGE (genotype plus genotype-by-environment) and GGB (genotype plus genotype-by-block-of-environments) biplots.

Key features

  • Stable, well-tested.

  • Many options to control graphic appearance.

Installation

```R

Install the released version from CRAN:

install.packages("gge")

Install the development version from GitHub:

install.packages("devtools") devtools::install_github("kwstat/gge") ```

Usage

In the example GGE biplot below, the genotypes are shown by green labels and the environments are shown by blue/gold labels. Each color determines a mega-environment or block-of-environments. A thick, solid line is drawn from the origin to the 'average' of the environments within each block, and then a thinner line is drawn from the average to the individual environments. These 'residual' vectors show the deviations within each group. A dashed line extends to the edge of the plotting window and labels the group.

gge

Owner

  • Name: Kevin Wright
  • Login: kwstat
  • Kind: user
  • Location: Iowa
  • Company: Corteva Agriscience

Statistician

GitHub Events

Total
  • Push event: 2
Last Year
  • Push event: 2

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 39
  • Total Committers: 3
  • Avg Commits per committer: 13.0
  • Development Distribution Score (DDS): 0.051
Past Year
  • Commits: 1
  • Committers: 1
  • Avg Commits per committer: 1.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Kevin Wright k****t@g****m 37
unknown w****i@U****t 1
Wright k****t@c****m 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 12 months ago

All Time
  • Total issues: 3
  • Total pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Total issue authors: 2
  • Total pull request authors: 0
  • Average comments per issue: 0.33
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • kwstat (2)
  • maizemaze (1)
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 1,386 last-month
  • Total docker downloads: 21,613
  • Total dependent packages: 2
  • Total dependent repositories: 2
  • Total versions: 10
  • Total maintainers: 1
cran.r-project.org: gge

Genotype Plus Genotype-by-Environment Biplots

  • Versions: 10
  • Dependent Packages: 2
  • Dependent Repositories: 2
  • Downloads: 1,386 Last month
  • Docker Downloads: 21,613
Rankings
Docker downloads count: 0.6%
Downloads: 11.8%
Average: 13.6%
Dependent packages count: 13.7%
Forks count: 17.0%
Dependent repos count: 19.2%
Stargazers count: 19.3%
Maintainers (1)
Last synced: 12 months ago

Dependencies

DESCRIPTION cran
  • nipals * imports
  • reshape2 * imports
  • agridat * suggests
  • knitr * suggests
  • lattice * suggests
  • rgl * suggests
  • rmarkdown * suggests
  • testthat * suggests