fmcsR

Mismatch Tolerant Maximum Common Substructure Searching

https://github.com/girke-lab/fmcsr

Science Score: 10.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
  • .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
    2 of 7 committers (28.6%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (0.9%) to scientific vocabulary

Keywords from Contributors

bioconductor-package bioconductor bioinformatics mass-spectrometry feature-detection metabolomics peak-detection proteomics chip-profiles chip-seq
Last synced: 11 months ago · JSON representation

Repository

Mismatch Tolerant Maximum Common Substructure Searching

Basic Info
  • Host: GitHub
  • Owner: girke-lab
  • Language: C++
  • Default Branch: master
  • Homepage:
  • Size: 480 KB
Statistics
  • Stars: 5
  • Watchers: 4
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created over 12 years ago · Last pushed over 10 years ago
Metadata Files
Readme

README

changelog

version 1.13.1 - 1.13.3
    - ported vignette to R Markdown

version 1.3.6 - 1.11.4
    - Vignette updates

version 1.3.2 - 1.3.6
	- Vignette updates

version 1.3.1
	- Added new fmcsR citation

version 1.1.3
	- Vignette updates

version 1.1.2
	- Help updates

version 1.1.1
	- Vignette updates

version 0.99.0
	- fmcsR submitted to Bioconductor

Owner

  • Name: Girke Lab
  • Login: girke-lab
  • Kind: organization
  • Email: thomas.girke@ucr.edu
  • Location: UC Riverside

Research and Teaching Repos

GitHub Events

Total
Last Year

Committers

Last synced: about 2 years ago

All Time
  • Total Commits: 37
  • Total Committers: 7
  • Avg Commits per committer: 5.286
  • Development Distribution Score (DDS): 0.459
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
khoran k****n@c****u 20
Thomas Girke t****e@c****u 8
Bioconductor Git-SVN Bridge b****c@b****g 4
d.tenenbaum d****m@b****8 2
mtmorgan@fhcrc.org m****n@f****g@b****8 1
s.arora s****a@b****8 1
Tyler Backman T****n 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 6
  • Total pull requests: 0
  • Average time to close issues: 6 days
  • Average time to close pull requests: N/A
  • Total issue authors: 1
  • Total pull request authors: 0
  • Average comments per issue: 0.33
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • khoran (6)
Pull Request Authors
Top Labels
Issue Labels
enhancement (3) bug (1)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • bioconductor 61,158 total
  • Total dependent packages: 1
  • Total dependent repositories: 0
  • Total versions: 5
  • Total maintainers: 1
bioconductor.org: fmcsR

Mismatch Tolerant Maximum Common Substructure Searching

  • Versions: 5
  • Dependent Packages: 1
  • Dependent Repositories: 0
  • Downloads: 61,158 Total
Rankings
Dependent repos count: 0.0%
Dependent packages count: 0.0%
Average: 6.1%
Downloads: 18.2%
Maintainers (1)
Last synced: 11 months ago

Dependencies

DESCRIPTION cran
  • ChemmineR * depends
  • R >= 2.10.0 depends
  • methods * depends
  • BiocGenerics * imports
  • ChemmineR * imports
  • RUnit * imports
  • methods * imports
  • parallel * imports
  • BiocStyle * suggests
  • knitcitations * suggests
  • knitr * suggests
  • knitrBootstrap * suggests