GWASTools
Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis
Science Score: 23.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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✓Committers with academic emails
6 of 17 committers (35.3%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (4.4%) to scientific vocabulary
Keywords from Contributors
Repository
Classes for storing very large GWAS data sets and annotation, and functions for GWAS data cleaning and analysis
Basic Info
- Host: GitHub
- Owner: smgogarten
- Language: R
- Default Branch: devel
- Homepage: https://bioconductor.org/packages/GWASTools
- Size: 1010 KB
Statistics
- Stars: 18
- Watchers: 2
- Forks: 6
- Open Issues: 2
- Releases: 0
Metadata Files
README.md
GWASTools
Tools for Genome Wide Association Studies
This package contains tools for facilitating cleaning (quality control and quality assurance) and analysis of GWAS data.
Bioconductor
http://www.bioconductor.org/packages/release/bioc/html/GWASTools.html
Installation
R
if (!requireNamespace("BiocManager", quietly=TRUE))
install.packages("BiocManager")
BiocManager::install("GWASTools")
Owner
- Name: Stephanie M. Gogarten
- Login: smgogarten
- Kind: user
- Location: Seattle, WA
- Company: Department of Biostatistics, University of Washington
- Repositories: 7
- Profile: https://github.com/smgogarten
GitHub Events
Total
- Watch event: 3
- Push event: 1
Last Year
- Watch event: 3
- Push event: 1
Committers
Last synced: about 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Stephanie Gogarten | s****s@u****u | 283 |
| Adrienne Stilp | a****p@u****u | 49 |
| Stephanie M. Gogarten | s****s@u****u | 40 |
| Dan Tenenbaum | d****a@f****g | 23 |
| Nitesh Turaga | n****a@g****m | 14 |
| Sarah Nelson | s****n@u****u | 12 |
| Daniel E. Weeks | w****s@p****u | 9 |
| smgogarten | s****n@v****a | 7 |
| sonali | s****6@g****m | 5 |
| J Wokaty | j****y | 4 |
| Herve Pages | h****s@f****g | 4 |
| J Wokaty | j****y@s****u | 4 |
| Hervé Pagès | h****s@f****g | 2 |
| vobencha | v****n@r****g | 2 |
| vobencha | v****a@g****m | 2 |
| Sonali Kumari | 1****4 | 1 |
| Marc Carlson | m****n@f****g | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 11 months ago
All Time
- Total issues: 13
- Total pull requests: 5
- Average time to close issues: 3 months
- Average time to close pull requests: about 2 months
- Total issue authors: 11
- Total pull request authors: 4
- Average comments per issue: 1.77
- Average comments per pull request: 0.8
- Merged pull requests: 5
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 0
- Average time to close issues: about 23 hours
- Average time to close pull requests: N/A
- Issue authors: 1
- Pull request authors: 0
- Average comments per issue: 1.0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- ryshi06 (3)
- wangshuang2024 (1)
- treebreeder (1)
- ElicSY (1)
- Soo-Heon (1)
- KSkyeD (1)
- sonali8434 (1)
- niyati1211 (1)
- smgogarten (1)
- EDISON2022W (1)
- Mahantesh-Biradar (1)
Pull Request Authors
- sarahcn (2)
- DanielEWeeks (1)
- smgogarten (1)
- sonali8434 (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
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Total downloads:
- bioconductor 115,182 total
- Total dependent packages: 4
- Total dependent repositories: 0
- Total versions: 5
- Total maintainers: 1
bioconductor.org: GWASTools
Tools for Genome Wide Association Studies
- Homepage: https://github.com/smgogarten/GWASTools
- Documentation: https://bioconductor.org/packages/release/bioc/vignettes/GWASTools/inst/doc/GWASTools.pdf
- License: Artistic-2.0
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Latest release: 1.54.0
published about 1 year ago