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ouch

Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses

https://github.com/kingaa/ouch

Science Score: 36.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ✓
    codemeta.json file
    Found codemeta.json file
  • ○
    .zenodo.json file
  • ✓
    DOI references
    Found 10 DOI reference(s) in README
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 5 committers (20.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (13.1%) to scientific vocabulary

Keywords

adaptive-regime brownian-motion ornstein-uhlenbeck ornstein-uhlenbeck-models ouch phylogenetic-comparative-hypotheses phylogenetic-comparative-methods phylogenetic-data react
Last synced: 6 months ago · JSON representation

Repository

Ornstein-Uhlenbeck models for phylogenetic comparative hypotheses

Basic Info
Statistics
  • Stars: 16
  • Watchers: 4
  • Forks: 4
  • Open Issues: 0
  • Releases: 11
Topics
adaptive-regime brownian-motion ornstein-uhlenbeck ornstein-uhlenbeck-models ouch phylogenetic-comparative-hypotheses phylogenetic-comparative-methods phylogenetic-data react
Created over 10 years ago · Last pushed 9 months ago
Metadata Files
Readme License

README.md

ouch

Project Status: Active – The project has reached a stable, usable state and is being actively developed. Development Release CRAN Status Last CRAN release date R-CMD-check test-coverage codecov CRAN mirror monthly downloads CRAN mirror total downloads

Ornstein-Uhlenbeck models for Phylogenetic Comparative Hypotheses

See the package website for more information. Based on ideas described in the following papers:

Binary install

install.packages("ouch",repos="https://kingaa.github.io/")

Source install

library(devtools) install_github("kingaa/ouch")

Package manual

HTML PDF

Owner

  • Name: Aaron A King
  • Login: kingaa
  • Kind: user
  • Location: Ann Arbor
  • Company: University of Michigan

Nelson G. Hairston Collegiate Professor of Ecology & Evolutionary Biology, Complex Systems, and Mathematics

GitHub Events

Total
  • Watch event: 1
  • Push event: 1
Last Year
  • Watch event: 1
  • Push event: 1

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 217
  • Total Committers: 5
  • Avg Commits per committer: 43.4
  • Development Distribution Score (DDS): 0.433
Past Year
  • Commits: 8
  • Committers: 1
  • Avg Commits per committer: 8.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Aaron A. King k****a@u****u 123
kingaa k****a@e****b 88
Aaron A King k****a 4
Marguerite Butler Anolis Pro ʻ****8@g****ʻ 1
stefan7th s****h@e****b 1
Committer Domains (Top 20 + Academic)
gmail.comʻ: 1 umich.edu: 1

Issues and Pull Requests

Last synced: 6 months ago

All Time
  • Total issues: 7
  • Total pull requests: 1
  • Average time to close issues: 17 days
  • Average time to close pull requests: 1 day
  • Total issue authors: 2
  • Total pull request authors: 1
  • Average comments per issue: 8.0
  • Average comments per pull request: 6.0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • mbutler808 (6)
  • soungalo (1)
Pull Request Authors
  • mbutler808 (1)
Top Labels
Issue Labels
enhancement (3) question (1)
Pull Request Labels
enhancement (1)

Packages

  • Total packages: 1
  • Total downloads:
    • cran 1,134 last-month
  • Total docker downloads: 43,390
  • Total dependent packages: 5
  • Total dependent repositories: 10
  • Total versions: 30
  • Total maintainers: 1
cran.r-project.org: ouch

Ornstein-Uhlenbeck Models for Phylogenetic Comparative Hypotheses

  • Versions: 30
  • Dependent Packages: 5
  • Dependent Repositories: 10
  • Downloads: 1,134 Last month
  • Docker Downloads: 43,390
Rankings
Docker downloads count: 0.6%
Dependent packages count: 8.2%
Dependent repos count: 9.2%
Average: 10.7%
Forks count: 12.2%
Stargazers count: 14.1%
Downloads: 20.0%
Maintainers (1)
kingaa@umich.edu
Last synced: 6 months ago

Dependencies

DESCRIPTION cran
  • R >= 3.6 depends
  • grDevices * imports
  • graphics * imports
  • methods * imports
  • stats * imports
  • subplex * imports
  • utils * imports
  • ape * suggests
.github/workflows/binary-build.yml actions
  • actions/checkout v3.1.0 composite
  • actions/upload-artifact v3.1.1 composite
  • r-lib/actions/setup-r v2.3.1 composite
  • r-lib/actions/setup-r-dependencies v2.3.1 composite
.github/workflows/r-cmd-check.yml actions
  • actions/checkout v3.1.0 composite
  • actions/upload-artifact v3.1.1 composite
  • r-lib/actions/check-r-package v2 composite
  • r-lib/actions/setup-r v2.3.1 composite
  • r-lib/actions/setup-r-dependencies v2.3.1 composite
.github/workflows/test-coverage.yml actions
  • actions/checkout v3.1.0 composite
  • r-lib/actions/setup-r v2.3.1 composite
  • r-lib/actions/setup-r-dependencies v2.3.1 composite