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paramlink

Parametric Linkage and Other Pedigree Analysis in R

https://github.com/magnusdv/paramlink

Science Score: 10.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ○
    codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 1 committers (100.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (10.0%) to scientific vocabulary
Last synced: 7 months ago · JSON representation

Repository

Parametric Linkage and Other Pedigree Analysis in R

Basic Info
  • Host: GitHub
  • Owner: magnusdv
  • Language: R
  • Default Branch: master
  • Size: 265 KB
Statistics
  • Stars: 0
  • Watchers: 2
  • Forks: 0
  • Open Issues: 0
  • Releases: 0
Created about 4 years ago · Last pushed almost 4 years ago
Metadata Files
Readme

README.Rmd 

---
output: github_document
---



```{r, include = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/README-",
  out.width = "100%"
)
```

# paramlink


[![CRAN status](https://www.r-pkg.org/badges/version/paramlink)](https://CRAN.R-project.org/package=paramlink)
[![](https://cranlogs.r-pkg.org/badges/grand-total/paramlink?color=yellow)](https://cran.r-project.org/package=paramlink)
[![](https://cranlogs.r-pkg.org/badges/last-month/paramlink?color=yellow)](https://cran.r-project.org/package=paramlink)

The `paramlink` package has been superseded by the [**pedsuite**](https://magnusdv.github.io/pedsuite/). In particular, the main features of `paramlink` can now be found in the following packages:

* [**pedtools**](https://github.com/magnusdv/pedtools): Basic handling of pedigrees and marker data
* [**paramlink2**](https://github.com/magnusdv/paramlink2): Parametric linkage analysis
* [**forrel**](https://github.com/magnusdv/forrel): Forensic applications
* [**ribd**](https://github.com/magnusdv/ribd): Relatedness coefficients and IBD triangle

Note that `paramlink` is *not* compatible with the `pedsuite`. It is maintained only for legacy purposes and should not be used in new projects.

Owner

  • Name: Magnus Dehli Vigeland
  • Login: magnusdv
  • Kind: user
  • Location: Oslo, Norway
  • Company: Department of Medical Genetics, University of Oslo

Statistical geneticist

GitHub Events

Total
Last Year

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 23
  • Total Committers: 1
  • Avg Commits per committer: 23.0
  • Development Distribution Score (DDS): 0.0
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Magnus Dehli Vigeland m****v@m****o 23
Committer Domains (Top 20 + Academic)
medisin.uio.no: 1

Issues and Pull Requests

Last synced: over 2 years ago

All Time
  • Total issues: 0
  • Total pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Total issue authors: 0
  • Total pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 318 last-month
  • Total dependent packages: 6
  • Total dependent repositories: 2
  • Total versions: 17
  • Total maintainers: 1
cran.r-project.org: paramlink

Parametric Linkage and Other Pedigree Analysis in R

  • Versions: 17
  • Dependent Packages: 6
  • Dependent Repositories: 2
  • Downloads: 318 Last month
Rankings
Dependent packages count: 7.3%
Dependent repos count: 19.3%
Average: 24.5%
Forks count: 27.8%
Downloads: 33.6%
Stargazers count: 34.6%
Maintainers (1)
m.d.vigeland@medisin.uio.no
Last synced: 7 months ago

Dependencies

DESCRIPTION cran
  • R >= 3.3 depends
  • assertthat * imports
  • graphics * imports
  • kinship2 * imports
  • maxLik * imports
  • stats * imports
  • utils * imports
  • igraph * suggests