partR2

R package to partition R2 among predictors in Generalized linear mixed models

https://github.com/mastoffel/partr2

Science Score: 13.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
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    Low similarity (0.7%) to scientific vocabulary
Last synced: 11 months ago · JSON representation

Repository

R package to partition R2 among predictors in Generalized linear mixed models

Basic Info
  • Host: GitHub
  • Owner: mastoffel
  • License: other
  • Language: R
  • Default Branch: master
  • Homepage:
  • Size: 3.78 MB
Statistics
  • Stars: 22
  • Watchers: 5
  • Forks: 3
  • Open Issues: 4
  • Releases: 1
Created almost 9 years ago · Last pushed almost 2 years ago
Metadata Files
Readme Changelog License

README-plot-1.png

PNG


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Owner

  • Name: Martin Stoffel
  • Login: mastoffel
  • Kind: user
  • Location: Edinburgh
  • Company: The Alan Turing Institute

Research Data Scientist @alan-turing-institute. Previously PhD / Postdoc in Evolutionary Genetics and Biostatistics.

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itchyshin i****n@g****m 2

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Last synced: 12 months ago

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Packages

  • Total packages: 1
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cran.r-project.org: partR2

Partitioning R2 in GLMMs

  • Versions: 2
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 672 Last month
  • Docker Downloads: 21,613
Rankings
Stargazers count: 12.9%
Forks count: 14.9%
Average: 25.0%
Dependent packages count: 29.8%
Downloads: 31.9%
Dependent repos count: 35.5%
Last synced: 12 months ago

Dependencies

DESCRIPTION cran
  • R >= 3.5.0 depends
  • dplyr >= 1.0.0 imports
  • ggplot2 >= 3.3.0 imports
  • lme4 >= 1.1 imports
  • magrittr >= 1.5 imports
  • methods * imports
  • pbapply >= 1.4 imports
  • purrr >= 0.3.3 imports
  • rlang >= 0.4.2 imports
  • stats * imports
  • tibble >= 2.1.3 imports
  • tidyr >= 1.1 imports
  • covr * suggests
  • furrr * suggests
  • future * suggests
  • knitr * suggests
  • patchwork * suggests
  • rmarkdown * suggests
  • testthat * suggests