Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (11.8%) to scientific vocabulary
Keywords
data-cleaning
r
r-package
rstats
taxon
taxonomy
Keywords from Contributors
traits
biodiversity
functional-trait
genome
unit-testing
mocking
bioinformatics
taxize
darwincore
wikipedia-api
Last synced: 6 months ago
·
JSON representation
Repository
taxonomic classes for R
Basic Info
- Host: GitHub
- Owner: ropensci
- License: other
- Language: R
- Default Branch: master
- Homepage: https://docs.ropensci.org/taxa
- Size: 20.7 MB
Statistics
- Stars: 49
- Watchers: 13
- Forks: 12
- Open Issues: 56
- Releases: 9
Topics
data-cleaning
r
r-package
rstats
taxon
taxonomy
Created almost 10 years ago
· Last pushed 7 months ago
Metadata Files
Readme
Changelog
Contributing
License
Code of conduct
README.Rmd
---
output: md_document
---
taxa
====
```{r echo=FALSE}
knitr::opts_chunk$set(
warning = FALSE,
message = FALSE,
collapse = TRUE,
comment = "#>"
)
```
[](https://www.repostatus.org/)
[](https://cran.r-project.org/package=taxa)
This is an R package that provides classes to store and manipulate taxonomic data.
Most of the classes can be used like base R vectors.
This project is a partial rewrite of the previous version of `taxa` and is currently under development.
**A note about recent changes:**
This is beginning of a complete rewrite of the previous `taxa` package to make the more basic component classes more like base R vectors.
The `taxmap` class is not yet reimplemented, but will be similar to the class in the previous versions of taxa.
The old version of `taxa` has been incorporated into the `metacoder` package until this version of taxa is mature, at which time `metacoder` will also use this version.
## Contributors
* [Zachary Foster](https://github.com/zachary-foster)
* [Scott Chamberlain](https://github.com/sckott)
## Comments and contributions
We welcome comments, criticisms, and especially contributions!
GitHub issues are the preferred way to report bugs, ask questions, or request new features.
You can submit issues here:
https://github.com/ropensci/taxa/issues
## Meta
* Please [report any issues or bugs](https://github.com/ropensci/taxa/issues).
* License: MIT
* Get citation information for `taxa` in R doing `citation(package = 'taxa')`
* Please note that this project is released with a Contributor Code of Conduct (see CONDUCT.md). By participating in this project you agree to abide by its terms.
Owner
- Name: rOpenSci
- Login: ropensci
- Kind: organization
- Email: info@ropensci.org
- Location: Berkeley, CA
- Website: https://ropensci.org/
- Twitter: rOpenSci
- Repositories: 307
- Profile: https://github.com/ropensci
GitHub Events
Total
- Watch event: 1
- Push event: 2
Last Year
- Watch event: 1
- Push event: 2
Committers
Last synced: about 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Zachary S.L Foster | z****9@g****m | 492 |
| Scott Chamberlain | m****s@g****m | 74 |
| Zachary S.L Foster | Z****r | 6 |
| Rob Gilmore | r****7@g****m | 2 |
| Lionel Henry | l****y@g****m | 1 |
| Martin O'Neill | 3****e@u****m | 1 |
| Rekyt | m****e@e****r | 1 |
| rOpenSci Bot | m****t@g****m | 1 |
Committer Domains (Top 20 + Academic)
ens-lyon.fr: 1
Issues and Pull Requests
Last synced: 6 months ago
All Time
- Total issues: 93
- Total pull requests: 7
- Average time to close issues: about 1 month
- Average time to close pull requests: about 2 hours
- Total issue authors: 14
- Total pull request authors: 5
- Average comments per issue: 2.83
- Average comments per pull request: 1.71
- Merged pull requests: 7
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- zachary-foster (70)
- sckott (8)
- sdhutchins (2)
- grabear (2)
- janstrauss1 (2)
- maelle (1)
- emankhalaf (1)
- brendanf (1)
- arendsee (1)
- lindsayveazey (1)
- nick-youngblut (1)
- kamapu (1)
- DavisVaughan (1)
- ctekellogg (1)
Pull Request Authors
- zachary-foster (3)
- sckott (1)
- grabear (1)
- Rekyt (1)
- marsnone (1)
Top Labels
Issue Labels
bug (9)
enhancement (1)
help wanted (1)
cookbook recipe (1)
Pull Request Labels
Packages
- Total packages: 2
-
Total downloads:
- cran 574 last-month
- Total docker downloads: 109,781
-
Total dependent packages: 2
(may contain duplicates) -
Total dependent repositories: 4
(may contain duplicates) - Total versions: 18
- Total maintainers: 1
cran.r-project.org: taxa
Classes for Storing and Manipulating Taxonomic Data
- Homepage: https://docs.ropensci.org/taxa/
- Documentation: http://cran.r-project.org/web/packages/taxa/taxa.pdf
- License: MIT + file LICENSE
-
Latest release: 0.4.4
published 7 months ago
Rankings
Forks count: 5.8%
Stargazers count: 7.0%
Dependent packages count: 13.6%
Average: 13.9%
Dependent repos count: 14.5%
Downloads: 16.4%
Docker downloads count: 26.0%
Maintainers (1)
Last synced:
6 months ago
conda-forge.org: r-taxa
- Homepage: https://github.com/ropensci/taxa
- License: MIT
-
Latest release: 0.4.2
published almost 4 years ago
Rankings
Dependent repos count: 34.0%
Stargazers count: 37.7%
Forks count: 39.0%
Average: 40.5%
Dependent packages count: 51.2%
Last synced:
6 months ago
Dependencies
DESCRIPTION
cran
- R >= 3.0.2 depends
- vctrs * depends
- cli * imports
- crayon * imports
- dplyr * imports
- magrittr * imports
- methods * imports
- pillar * imports
- rlang * imports
- stringr * imports
- tibble * imports
- utils * imports
- viridisLite * imports
- rmarkdown >= 0.9.6 suggests
- roxygen2 >= 6.0.1 suggests
- testthat * suggests