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pbmcapply

Tracking the progress of mc*apply with progress bar.

https://github.com/kvnkuang/pbmcapply

Science Score: 10.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ○
    codemeta.json file
  • ○
    .zenodo.json file
  • ○
    DOI references
  • ○
    Academic publication links
  • ✓
    Committers with academic emails
    1 of 5 committers (20.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (10.1%) to scientific vocabulary

Keywords

parallelization progress-bar r
Last synced: 6 months ago · JSON representation

Repository

Tracking the progress of mc*apply with progress bar.

Basic Info
  • Host: GitHub
  • Owner: kvnkuang
  • License: other
  • Language: R
  • Default Branch: master
  • Size: 88.9 KB
Statistics
  • Stars: 45
  • Watchers: 5
  • Forks: 5
  • Open Issues: 10
  • Releases: 0
Topics
parallelization progress-bar r
Created over 9 years ago · Last pushed almost 4 years ago
Metadata Files
Readme License

README.md

pbmcapply: tracking the progress of mc*apply in R.

A package helps you track and visualize the progress of parallel version of vectorized R functions (mc*apply).

Flowchart

Please check this blog article for an comparasion between available methods to track progress in R.

Notice: Parallelization (mc.core > 1) works on *nix (Linux, Unix such as macOS) only due to the lack of fork() functionality, which is essential for mcapply, on Windows.

Installation

Stable release on CRAN

Version: CRAN version Download count

Package page: https://cran.r-project.org/web/packages/pbmcapply

Install pbmcapply by pasting this command in your R console:

install.packages('pbmcapply')

Development release on Github

Version: GitHub release Build Status

Project page: https://github.com/kvnkuang/pbmcapply

Build pbmcapply by pasting these commands in your R console:

library(devtools) install_github("kvnkuang/pbmcapply", ref = "dev")

Contributors

Many thanks to all contributors for their time and effort to make this project better.

License

MIT license

Owner

  • Name: Kevin Kuang
  • Login: kvnkuang
  • Kind: user
  • Location: Toronto, Canada

Think computationally to solve Biology questions.

GitHub Events

Total
  • Watch event: 2
  • Issue comment event: 1
Last Year
  • Watch event: 2
  • Issue comment event: 1

Committers

Last synced: 7 months ago

All Time
  • Total Commits: 92
  • Total Committers: 5
  • Avg Commits per committer: 18.4
  • Development Distribution Score (DDS): 0.087
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Kevin Kuang k****g 84
Quyu Kong u****8@a****u 5
Thierry Gosselin t****n@i****m 1
Ivan Krylov k****t@g****m 1
Gergely Daróczi d****g@r****t 1
Committer Domains (Top 20 + Academic)
rapporter.net: 1 anu.edu.au: 1

Issues and Pull Requests

Last synced: 7 months ago

All Time
  • Total issues: 35
  • Total pull requests: 20
  • Average time to close issues: about 2 months
  • Average time to close pull requests: about 3 hours
  • Total issue authors: 26
  • Total pull request authors: 5
  • Average comments per issue: 2.89
  • Average comments per pull request: 0.3
  • Merged pull requests: 20
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • scottkosty (5)
  • kvnkuang (3)
  • HenrikBengtsson (3)
  • martin-ueding (2)
  • zhoutang776 (1)
  • hsmith9002 (1)
  • julioasotodv (1)
  • iSevenDays (1)
  • adrfantini (1)
  • felberr (1)
  • 33Vito (1)
  • ExperimentalConservation (1)
  • caljnj (1)
  • samuel-marsh (1)
  • laurenfitch (1)
Pull Request Authors
  • kvnkuang (16)
  • thierrygosselin (1)
  • qykong (1)
  • daroczig (1)
  • aitap (1)
Top Labels
Issue Labels
enhancement (9) bug (8)
Pull Request Labels
bug (1) enhancement (1)

Packages

  • Total packages: 2
  • Total downloads:
    • cran 11,769 last-month
  • Total docker downloads: 56,940
  • Total dependent packages: 41
    (may contain duplicates)
  • Total dependent repositories: 78
    (may contain duplicates)
  • Total versions: 19
  • Total maintainers: 1
cran.r-project.org: pbmcapply

Tracking the Progress of Mc*pply with Progress Bar

  • Versions: 16
  • Dependent Packages: 40
  • Dependent Repositories: 75
  • Downloads: 11,769 Last month
  • Docker Downloads: 56,940
Rankings
Dependent packages count: 2.1%
Dependent repos count: 2.7%
Downloads: 5.7%
Stargazers count: 7.7%
Average: 8.3%
Forks count: 10.8%
Docker downloads count: 21.1%
Maintainers (1)
kvn.kuang@mail.utoronto.ca
Last synced: 6 months ago
conda-forge.org: r-pbmcapply
  • Versions: 3
  • Dependent Packages: 1
  • Dependent Repositories: 3
Rankings
Dependent repos count: 18.0%
Dependent packages count: 29.0%
Average: 35.9%
Stargazers count: 42.7%
Forks count: 54.1%
Last synced: 6 months ago

Dependencies

DESCRIPTION cran
  • parallel * depends
  • utils * depends