pccc

Pediatric Complex Chronic Conditions: An R Package

https://github.com/cud2v/pccc

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
  • .zenodo.json file
  • DOI references
    Found 4 DOI reference(s) in README
  • Academic publication links
  • Committers with academic emails
    5 of 8 committers (62.5%) from academic institutions
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (11.5%) to scientific vocabulary
Last synced: 11 months ago · JSON representation

Repository

Pediatric Complex Chronic Conditions: An R Package

Basic Info
  • Host: GitHub
  • Owner: CUD2V
  • Language: SAS
  • Default Branch: master
  • Homepage:
  • Size: 56.2 MB
Statistics
  • Stars: 5
  • Watchers: 4
  • Forks: 8
  • Open Issues: 6
  • Releases: 0
Created over 9 years ago · Last pushed about 1 year ago
Metadata Files
Readme Contributing

README.md

pccc

Pediatric Complex Chronic Conditions: A R Package

Project Status: Active – The project has reached a stable, usable state and is being actively developed. R-CMD-check

CRAN_Status_Badge CRAN mirror downloads Total CRAN mirror downloads

Motivation

Version 2 of PCCC Criteria

Pediatric complex chronic conditions classification system version 2:.

    Feudtner, C., Feinstein, J.A., Zhong, W. et al. Pediatric complex
    chronic conditions classification system version 2: updated for ICD-10
    and complex medical technology dependence and transplantation. BMC
    Pediatr 14, 199 (2014). https://doi.org/10.1186/1471-2431-14-199

["Pediatric complex chronic conditions classification system version 2: updated for ICD-10 and complex medical technology dependence and transplantation" by Chris Feudtner, James A Feinstein, Wenjun Zhong, Matt Hall and Dingwei Dai]

SAS and STATA scripts to generate CCC categories from ICD codes were provided by Feudtner et al. as an appendix to the above manuscript. However, those scripts can take many hours to run on large datasets.

This package provides R functions to generate the CCC categories. Because the R functions are built with a C++ back-end, they are very computationally efficient.

The pccc package version 1.0.z implemented this version of the PCCC criteria.

Version 3 of the PCCC Criteria

Pediatric Complex Chronic Condition System Version 3

    Feinstein JA, Hall M, Davidson A, Feudtner C. Pediatric Complex Chronic
    Condition System Version 3. JAMA Netw Open. 2024;7(7):e2420579.
    doi:10.1001/jamanetworkopen.2024.20579

The criteria has been updated and there is a major conceptual change in the way technology dependencies are accounted for.

Version 3 of the pccc R package (skipping version 2 so the package version will match the system version) will implement version 3 of the PCCC.

Installation

From CRAN

Released version available on The Comprehensive R Archive Network at https://CRAN.R-project.org/package=pccc.

Developmental version

You can install the developmental version of pccc directly from github using the remotes package:

r if (!("remotes" %in% rownames(installed.packages()))) { warning("installing remotes from https://cran.rstudio.com") install.packages("remotes", repo = "https://cran.rstudio.com") } remotes::install_github("CUD2V/pccc", build_vignettes = TRUE)

NOTE: If you are working on a Windows machine you will likely need Rtools.

If you are on a Linux machine or have GNU make configured you should be able to build and install this package by cloning the repository and running

bash make install

Owner

  • Name: CU Data Science to Patient Value (D2V)
  • Login: CUD2V
  • Kind: organization

GitHub Events

Total
  • Create event: 3
  • Release event: 1
  • Issues event: 1
  • Watch event: 1
  • Delete event: 1
  • Issue comment event: 1
  • Push event: 15
  • Pull request event: 2
Last Year
  • Create event: 3
  • Release event: 1
  • Issues event: 1
  • Watch event: 1
  • Delete event: 1
  • Issue comment event: 1
  • Push event: 15
  • Pull request event: 2

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 153
  • Total Committers: 8
  • Avg Commits per committer: 19.125
  • Development Distribution Score (DDS): 0.575
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Seth Russell m****n 65
Peter DeWitt (latitude) p****t@u****u 44
James Feinstein j****n@u****u 16
Tell Bennett t****1@g****m 9
Peter DeWitt d****e@g****m 9
Tell Bennett t****t@u****u 5
Peter DeWitt p****t@c****u 4
ck2136 c****m@u****u 1
Committer Domains (Top 20 + Academic)

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 31
  • Total pull requests: 13
  • Average time to close issues: 3 months
  • Average time to close pull requests: 2 days
  • Total issue authors: 6
  • Total pull request authors: 5
  • Average comments per issue: 2.61
  • Average comments per pull request: 0.08
  • Merged pull requests: 11
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 1
  • Pull requests: 1
  • Average time to close issues: N/A
  • Average time to close pull requests: 8 days
  • Issue authors: 1
  • Pull request authors: 1
  • Average comments per issue: 1.0
  • Average comments per pull request: 0.0
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • tdbennett (12)
  • dewittpe (10)
  • magic-lantern (6)
  • jamesfeinstein (1)
  • koheihasegawamd (1)
  • stephenrho (1)
Pull Request Authors
  • dewittpe (5)
  • tdbennett (5)
  • magic-lantern (2)
  • stephenrho (1)
  • ck2136 (1)
Top Labels
Issue Labels
enhancement (9) bug (8) question (2) duplicate (1) wontfix (1) pccc_v2 (1)
Pull Request Labels
bug (2) enhancement (2) pccc_v2 (2)

Packages

  • Total packages: 1
  • Total downloads:
    • cran 521 last-month
  • Total dependent packages: 0
  • Total dependent repositories: 0
  • Total versions: 7
  • Total maintainers: 1
cran.r-project.org: pccc

Pediatric Complex Chronic Conditions

  • Versions: 7
  • Dependent Packages: 0
  • Dependent Repositories: 0
  • Downloads: 521 Last month
Rankings
Forks count: 8.3%
Stargazers count: 22.5%
Average: 29.1%
Dependent packages count: 29.8%
Dependent repos count: 35.5%
Downloads: 49.3%
Maintainers (1)
Last synced: 11 months ago

Dependencies

DESCRIPTION cran
  • R >= 3.5.0 depends
  • Rcpp >= 0.12.11 imports
  • dplyr >= 0.7.0 imports
  • covr * suggests
  • knitr * suggests
  • readr * suggests
  • rmarkdown * suggests
  • testthat * suggests