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peperr

peperr R package

https://github.com/fbertran/peperr

Science Score: 23.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ○
    codemeta.json file
  • ○
    .zenodo.json file
  • ✓
    DOI references
    Found 6 DOI reference(s) in README
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ○
    Committers with academic emails
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (16.5%) to scientific vocabulary
Last synced: 11 months ago · JSON representation

Repository

peperr R package

Basic Info
  • Host: GitHub
  • Owner: fbertran
  • License: gpl-3.0
  • Language: R
  • Default Branch: main
  • Size: 250 KB
Statistics
  • Stars: 2
  • Watchers: 2
  • Forks: 0
  • Open Issues: 1
  • Releases: 0
Created over 5 years ago · Last pushed over 4 years ago
Metadata Files
Readme License

README.Rmd 



```{r, include = FALSE}
knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>",
  fig.path = "man/figures/README-",
  out.width = "100%"
)
```

# peperr

# Parallelised Estimation of Prediction Error 

## Maintainer F. Bertrand



[![Lifecycle: stable](https://img.shields.io/badge/lifecycle-stable-green.svg)](https://lifecycle.r-lib.org/articles/stages.html)
[![Project Status: Active – The project has reached a stable, usable state and is being actively developed.](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active)
[![R-CMD-check](https://github.com/fbertran/peperr/workflows/R-CMD-check/badge.svg)](https://github.com/fbertran/peperr/actions)
[![Codecov test coverage](https://codecov.io/gh/fbertran/peperr/branch/master/graph/badge.svg)](https://app.codecov.io/gh/fbertran/peperr?branch=master)
[![CRAN status](https://www.r-pkg.org/badges/version/peperr)](https://CRAN.R-project.org/package=peperr)
[![CRAN RStudio mirror downloads](https://cranlogs.r-pkg.org/badges/peperr)](https://cran.r-project.org/package=peperr)
[![GitHub Repo stars](https://img.shields.io/github/stars/fbertran/peperr?style=social)](https://github.com/fbertran/peperr)
[![DOI](https://zenodo.org/badge/347140355.svg)](https://zenodo.org/badge/latestdoi/347140355)


`peperr` is designed for prediction error estimation through resampling techniques, possibly accelerated by parallel execution on a compute cluster. Newly developed model fitting routines can be easily incorporated. Methods used in the package are detailed in Porzelius Ch., Binder H. and Schumacher M. (2009) [10.1093/bioinformatics/btp062](https://doi.org/10.1093/bioinformatics/btp062) and were used, for instance, in Porzelius Ch., Schumacher M.and  Binder H. (2011) [10.1007/s00180-011-0236-6](https://doi.org/10.1007/s00180-011-0236-6).

## Installation

You can install the released version of peperr from [CRAN](https://CRAN.R-project.org) with:

```{r, eval = FALSE}
install.packages("peperr")
```

And the development version from [GitHub](https://github.com/) with:

```{r, eval = FALSE}
install.packages("devtools")
devtools::install_github("fbertran/peperr")
```

Owner

  • Name: Frederic Bertrand
  • Login: fbertran
  • Kind: user
  • Location: Troyes, France
  • Company: Technology University of Troyes

Full professor in applied mathematics, statistics and modelling at the university of technology of Troyes

GitHub Events

Total
Last Year

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 7
  • Total Committers: 1
  • Avg Commits per committer: 7.0
  • Development Distribution Score (DDS): 0.0
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Frederic Bertrand f****d@u****r 7
Committer Domains (Top 20 + Academic)
utt.fr: 1

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 2
  • Total pull requests: 0
  • Average time to close issues: 2 days
  • Average time to close pull requests: N/A
  • Total issue authors: 2
  • Total pull request authors: 0
  • Average comments per issue: 0.5
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
  • zhizuio (1)
  • SamGG (1)
Pull Request Authors
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 524 last-month
  • Total docker downloads: 21,777
  • Total dependent packages: 1
  • Total dependent repositories: 4
  • Total versions: 17
  • Total maintainers: 1
cran.r-project.org: peperr

Parallelised Estimation of Prediction Error

  • Versions: 17
  • Dependent Packages: 1
  • Dependent Repositories: 4
  • Downloads: 524 Last month
  • Docker Downloads: 21,777
Rankings
Docker downloads count: 12.6%
Dependent repos count: 14.6%
Dependent packages count: 18.1%
Average: 20.9%
Downloads: 24.6%
Stargazers count: 27.8%
Forks count: 27.8%
Maintainers (1)
frederic.bertrand@utt.fr
Last synced: 11 months ago

Dependencies

DESCRIPTION cran
  • methods * depends
  • snowfall * depends
  • survival * depends
  • codetools * suggests
  • locfit * suggests
  • penalized * suggests