Science Score: 13.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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○codemeta.json file
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○.zenodo.json file
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✓DOI references
Found 1 DOI reference(s) in README -
○Academic publication links
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○Committers with academic emails
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○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (5.4%) to scientific vocabulary
Repository
AnnotationBustR
Basic Info
Statistics
- Stars: 5
- Watchers: 2
- Forks: 4
- Open Issues: 8
- Releases: 4
Metadata Files
README.md
AnnotationBustR
AnnotationBustR: An R package to extract sub-sequences from GenBank annotations. For a detailed description of the package see Borstein SR, and O’Meara BC. 2018. AnnotationBustR: an R package to extract subsequences from GenBank annotations. PeerJ 6:e5179. 10.7717/peerj.5179.
For a detailed walkthrough on how to use AnnotationBustR, see the vignette: https://github.com/sborstein/AnnotationBustR/blob/master/vignettes/AnnotationBustR-vignette.md
Owner
- Name: Sam Borstein
- Login: sborstein
- Kind: user
- Location: Ann Arbor, Michigan
- Company: University of Michigan
- Website: https://lsa.umich.edu/eeb/people/postdoctoral-fellows/sam-borstein.html
- Repositories: 7
- Profile: https://github.com/sborstein
Postdoctoral Researcher at the University of Michigan Department of Ecology & Evolutionary Biology
GitHub Events
Total
Last Year
Committers
Last synced: almost 3 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Sam Borstein | s****m@b****m | 201 |
| Sam Borstein | s****n | 55 |
| Brian O'Meara | o****n@g****m | 11 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 12 months ago
All Time
- Total issues: 25
- Total pull requests: 1
- Average time to close issues: about 2 months
- Average time to close pull requests: over 3 years
- Total issue authors: 9
- Total pull request authors: 1
- Average comments per issue: 1.48
- Average comments per pull request: 0.0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 0
- Pull requests: 0
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 0
- Pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- sborstein (16)
- haruosuz (2)
- omarkr8 (1)
- NILamprou (1)
- ThomasLemarcis (1)
- markscherz (1)
- ptitle (1)
- bjkramerumnedu (1)
Pull Request Authors
- gitter-badger (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 1
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Total downloads:
- cran 369 last-month
- Total docker downloads: 21,613
- Total dependent packages: 0
- Total dependent repositories: 0
- Total versions: 4
- Total maintainers: 1
cran.r-project.org: AnnotationBustR
Extract Subsequences from GenBank Annotations
- Homepage: https://github.com/sborstein/AnnotationBustR
- Documentation: http://cran.r-project.org/web/packages/AnnotationBustR/AnnotationBustR.pdf
- License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
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Latest release: 1.3.0
published almost 6 years ago
Rankings
Maintainers (1)
Dependencies
- R >= 3.4 depends
- ape >= 4.1 imports
- seqinr >= 3.3 imports
- knitr * suggests
- rmarkdown * suggests
- testthat * suggests