Bchron

A Bayesian radiocarbon chronology model with R

https://github.com/andrewcparnell/bchron

Science Score: 26.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • CITATION.cff file
  • codemeta.json file
    Found codemeta.json file
  • .zenodo.json file
    Found .zenodo.json file
  • DOI references
  • Academic publication links
  • Committers with academic emails
  • Institutional organization owner
  • JOSS paper metadata
  • Scientific vocabulary similarity
    Low similarity (13.4%) to scientific vocabulary
Last synced: 10 months ago · JSON representation

Repository

A Bayesian radiocarbon chronology model with R

Basic Info
Statistics
  • Stars: 37
  • Watchers: 10
  • Forks: 11
  • Open Issues: 6
  • Releases: 5
Created almost 11 years ago · Last pushed 10 months ago
Metadata Files
Readme Changelog

README.md

cran version rstudio mirror downloads rstudio mirror downloads Codecov test coverage R build status

New: Bchron website

Bchron is a Bayesian chronology model implemented in R.

The package enables quick calibration of radiocarbon dates under various calibration curves (including user generated ones); Age-depth modelling as per the algorithm of Haslett and Parnell (2008); Relative sea level rate estimation incorporating time uncertainty in polynomial regression models; and non-parametric phase modelling via Gaussian mixtures as a means to determine the activity of a site (and as an alternative to the Oxcal function SUM).

To install the development version of the package type:

```

If required install remotes:

if(!require(remotes)) install.packages('remotes') remotes::install_github('andrewcparnell/Bchron') ```

You can then explore the package with:

library(Bchron) help(Bchronology) # Help on the chronology modelling function help(BchronCalibrate) # Help on the calibrate function

To install the stable version of the package go to R and type:

install.packages('Bchron')

Now start using Bchron!

Owner

  • Name: Andrew Parnell
  • Login: andrewcparnell
  • Kind: user
  • Location: Dublin, Ireland
  • Company: Maynooth University

Bayesian Statistician based in the Hamilton Institute, Maynooth University, Co Kildare, Ireland

GitHub Events

Total
  • Issues event: 2
  • Watch event: 1
  • Push event: 14
  • Fork event: 1
Last Year
  • Issues event: 2
  • Watch event: 1
  • Push event: 14
  • Fork event: 1

Committers

Last synced: over 2 years ago

All Time
  • Total Commits: 349
  • Total Committers: 4
  • Avg Commits per committer: 87.25
  • Development Distribution Score (DDS): 0.527
Past Year
  • Commits: 6
  • Committers: 2
  • Avg Commits per committer: 3.0
  • Development Distribution Score (DDS): 0.167
Top Committers
Name Email Commits
Andrew Parnell a****l@m****e 165
Andrew Parnell a****l@g****m 114
Andrew Parnell a****l@u****e 69
Brett Longworth b****h@g****m 1
Committer Domains (Top 20 + Academic)
ucd.ie: 1 mu.ie: 1

Issues and Pull Requests

Last synced: 11 months ago

All Time
  • Total issues: 28
  • Total pull requests: 5
  • Average time to close issues: 4 months
  • Average time to close pull requests: 7 months
  • Total issue authors: 16
  • Total pull request authors: 4
  • Average comments per issue: 6.43
  • Average comments per pull request: 1.2
  • Merged pull requests: 1
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 3
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 3
  • Pull request authors: 0
  • Average comments per issue: 0.0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
Top Authors
Issue Authors
  • cmbarton (10)
  • benmarwick (3)
  • GPawi (2)
  • IanMoffat (1)
  • nickmckay (1)
  • Numaios (1)
  • shheidgen (1)
  • orb16 (1)
  • jwdoherty (1)
  • allisonstegner (1)
  • kcosta6289 (1)
  • kbh022 (1)
  • andymacalister (1)
  • taphocoenose (1)
  • SophArch (1)
Pull Request Authors
  • blongworth (2)
  • benmarwick (1)
  • andrewdolman (1)
  • ercrema (1)
Top Labels
Issue Labels
enhancement (1)
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 779 last-month
  • Total docker downloads: 21,777
  • Total dependent packages: 2
  • Total dependent repositories: 17
  • Total versions: 32
  • Total maintainers: 1
cran.r-project.org: Bchron

Age-Depth Radiocarbon Modelling

  • Versions: 32
  • Dependent Packages: 2
  • Dependent Repositories: 17
  • Downloads: 779 Last month
  • Docker Downloads: 21,777
Rankings
Dependent repos count: 6.9%
Forks count: 7.3%
Stargazers count: 9.0%
Average: 10.4%
Docker downloads count: 12.6%
Downloads: 13.2%
Dependent packages count: 13.7%
Maintainers (1)
Last synced: 10 months ago

Dependencies

DESCRIPTION cran
  • R >= 3.4.0 depends
  • MASS * imports
  • checkmate * imports
  • coda * imports
  • dplyr * imports
  • ggforce * imports
  • ggplot2 * imports
  • ggridges * imports
  • magrittr * imports
  • mclust * imports
  • purrr * imports
  • scales * imports
  • stringr * imports
  • utils * imports
  • covr * suggests
  • knitr * suggests
  • rmarkdown * suggests
  • testthat >= 3.0.0 suggests
.github/workflows/R-CMD-check.yaml actions
  • actions/cache v2 composite
  • actions/checkout v2 composite
  • actions/upload-artifact main composite
  • r-lib/actions/setup-pandoc v1 composite
  • r-lib/actions/setup-r v1 composite
.github/workflows/test-coverage.yaml actions
  • actions/cache v2 composite
  • actions/checkout v2 composite
  • r-lib/actions/setup-pandoc v1 composite
  • r-lib/actions/setup-r v1 composite
.github/workflows/check-standard.yaml actions
  • actions/checkout v3 composite
  • r-lib/actions/check-r-package v2 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/pkgdown.yaml actions
  • JamesIves/github-pages-deploy-action v4.5.0 composite
  • actions/checkout v4 composite
  • r-lib/actions/setup-pandoc v2 composite
  • r-lib/actions/setup-r v2 composite
  • r-lib/actions/setup-r-dependencies v2 composite
.github/workflows/rhub.yaml actions
  • r-hub/actions/checkout v1 composite
  • r-hub/actions/platform-info v1 composite
  • r-hub/actions/run-check v1 composite
  • r-hub/actions/setup v1 composite
  • r-hub/actions/setup-deps v1 composite
  • r-hub/actions/setup-r v1 composite