Science Score: 23.0%
This score indicates how likely this project is to be science-related based on various indicators:
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○CITATION.cff file
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✓codemeta.json file
Found codemeta.json file -
○.zenodo.json file
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○DOI references
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○Academic publication links
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✓Committers with academic emails
3 of 10 committers (30.0%) from academic institutions -
○Institutional organization owner
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○JOSS paper metadata
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○Scientific vocabulary similarity
Low similarity (11.1%) to scientific vocabulary
Repository
R package for bridge sampling
Basic Info
- Host: GitHub
- Owner: quentingronau
- Language: R
- Default Branch: master
- Size: 30.7 MB
Statistics
- Stars: 32
- Watchers: 5
- Forks: 18
- Open Issues: 18
- Releases: 0
Metadata Files
README.md
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bridgesampling: Bridge Sampling for Marginal Likelihoods and Bayes Factors
bridgesampling is an R package for conducting Bayesian model comparisons using bridge sampling (Meng & Wong, 1996).
Specifically, it allows one to compute marginal likelihoods, Bayes factors, and posterior model probabilities.
Meng, X.-L., & Wong, W. H. (1996). Simulating ratios of normalizing constants via a simple identity: A theoretical exploration. Statistica Sinica, 6, 831-860.
For additional information, see the vignettes with a hierarchical normal example implemented in Jags (link) and in Stan (link), and a Bayesian t-test example implemented in Stan (link).
Installation
bridgesamplingis available from CRAN so the current stable version can be installed directly via:install.packages("bridgesampling")To install the latest development version you will need the
devtoolspackage:devtools::install_github("quentingronau/bridgesampling@master")For building, use
--compact-vignettes="gs+qpdf"
Please note that this project is released with a Contributor Code of Conduct. By participating in this project you agree to abide by its terms.
Owner
- Name: Quentin F. Gronau
- Login: quentingronau
- Kind: user
- Repositories: 2
- Profile: https://github.com/quentingronau
GitHub Events
Total
- Issues event: 1
- Watch event: 1
- Issue comment event: 15
- Pull request event: 2
- Fork event: 1
Last Year
- Issues event: 1
- Watch event: 1
- Issue comment event: 15
- Pull request event: 2
- Fork event: 1
Committers
Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| quentingronau | q****u@g****m | 140 |
| Henrik Singmann | s****n@g****m | 133 |
| Kees Mulder | k****r@g****m | 41 |
| singmann | h****n@p****e | 10 |
| Quentin Gronau | q****6@c****u | 7 |
| Marc Ferradou | m****u@b****m | 1 |
| martyn | m****r@g****m | 1 |
| QUENTIN | q****n@r****l | 1 |
| Ben Goodrich | g****n@g****m | 1 |
| singmann | s****n | 1 |
Committer Domains (Top 20 + Academic)
Issues and Pull Requests
Last synced: 10 months ago
All Time
- Total issues: 30
- Total pull requests: 16
- Average time to close issues: 2 months
- Average time to close pull requests: 5 days
- Total issue authors: 22
- Total pull request authors: 9
- Average comments per issue: 3.4
- Average comments per pull request: 1.63
- Merged pull requests: 8
- Bot issues: 0
- Bot pull requests: 0
Past Year
- Issues: 1
- Pull requests: 4
- Average time to close issues: N/A
- Average time to close pull requests: N/A
- Issue authors: 1
- Pull request authors: 1
- Average comments per issue: 0.0
- Average comments per pull request: 2.5
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
Top Authors
Issue Authors
- paul-buerkner (3)
- lsolomyak (2)
- bnicenboim (2)
- singmann (2)
- lindeloev (2)
- fdabl (2)
- IreneSophia (2)
- utkuturk (1)
- hstojic (1)
- tfjaeger (1)
- FBartos (1)
- dcgerard (1)
- avehtari (1)
- JeffreyRStevens (1)
- yu-zhang-oYo (1)
Pull Request Authors
- GiorgioMB (4)
- keesmulder (3)
- crsh (2)
- singmann (2)
- martynplummer (1)
- zippeurfou (1)
- FBartos (1)
- mawilson1234 (1)
- bgoodri (1)
Top Labels
Issue Labels
Pull Request Labels
Packages
- Total packages: 2
-
Total downloads:
- cran 25,401 last-month
- Total docker downloads: 119,540
-
Total dependent packages: 21
(may contain duplicates) -
Total dependent repositories: 29
(may contain duplicates) - Total versions: 17
- Total maintainers: 1
cran.r-project.org: bridgesampling
Bridge Sampling for Marginal Likelihoods and Bayes Factors
- Homepage: https://github.com/quentingronau/bridgesampling
- Documentation: http://cran.r-project.org/web/packages/bridgesampling/bridgesampling.pdf
- License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
-
Latest release: 1.1-2
published about 5 years ago
Rankings
Maintainers (1)
conda-forge.org: r-bridgesampling
- Homepage: https://github.com/quentingronau/bridgesampling
- License: GPL-2.0-or-later
-
Latest release: 1.1_2
published about 5 years ago
Rankings
Dependencies
- R >= 3.0.0 depends
- Brobdingnag * imports
- Matrix * imports
- coda * imports
- methods * imports
- mvtnorm * imports
- parallel * imports
- scales * imports
- stringr * imports
- utils * imports
- BayesFactor * suggests
- MCMCpack * suggests
- R.rsp * suggests
- R2jags * suggests
- Rcpp * suggests
- RcppEigen * suggests
- knitr * suggests
- nimble * suggests
- rjags * suggests
- rmarkdown * suggests
- rstan * suggests
- rstanarm * suggests
- runjags * suggests
- testthat * suggests
- actions/cache v1 composite
- actions/checkout v2 composite
- actions/upload-artifact master composite
- r-lib/actions/setup-pandoc master composite
- r-lib/actions/setup-r master composite