CMF
R package for finding a joint low-rank representation for a collection of matrices with shared row or column entities.
Science Score: 20.0%
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○CITATION.cff file
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○codemeta.json file
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Links to: arxiv.org -
✓Committers with academic emails
1 of 2 committers (50.0%) from academic institutions -
○Institutional organization owner
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○Scientific vocabulary similarity
Low similarity (7.6%) to scientific vocabulary
Keywords
Repository
R package for finding a joint low-rank representation for a collection of matrices with shared row or column entities.
Basic Info
- Host: GitHub
- Owner: cyianor
- License: gpl-2.0
- Language: R
- Default Branch: main
- Homepage: https://cran.r-project.org/package=CMF
- Size: 101 KB
Statistics
- Stars: 1
- Watchers: 1
- Forks: 1
- Open Issues: 0
- Releases: 0
Topics
Metadata Files
README.md
Collective Matrix Factorization
Collective matrix factorization (CMF) finds joint low-rank representations for a collection of matrices with shared row or column entities. This code learns a variational Bayesian approximation for CMF, supporting multiple likelihood potentials and missing data, while identifying both factors shared by multiple matrices and factors private for each matrix.
For further details on the method see Klami et al. (2014). The package can also be used to learn Bayesian canonical correlation analysis (CCA) and group factor analysis (GFA) models, both of which are special cases of CMF. This is likely to be useful for people looking for CCA and GFA solutions supporting missing data and non-Gaussian likelihoods.
See Klami et al. (2013) and Virtanen et al. (2012) for details on Bayesian CCA and GFA, respectively.
- Original package authors: Arto Klami and Lauri Väre
- Maintainer: Felix Held
Install development version
To install the development version from GitHub, run
r
devtools::install_github("cyianor/CMF")
New features will be available here first.
Install CRAN version
To install the official CRAN version it is enough to run
r
install.packages("CMF")
Owner
- Name: Felix Held
- Login: cyianor
- Kind: user
- Company: University of Gothenburg
- Website: cyianor.github.io
- Repositories: 4
- Profile: https://github.com/cyianor
Graduate student in biostatistics
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Last synced: over 2 years ago
Top Committers
| Name | Commits | |
|---|---|---|
| Felix Held | f****d@g****m | 47 |
| Felix Held | f****d@c****e | 3 |
Committer Domains (Top 20 + Academic)
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Last synced: 6 months ago
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- Total pull requests: 0
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- Total issue authors: 0
- Total pull request authors: 0
- Average comments per issue: 0
- Average comments per pull request: 0
- Merged pull requests: 0
- Bot issues: 0
- Bot pull requests: 0
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- Pull requests: 0
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- Issue authors: 0
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Packages
- Total packages: 1
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Total downloads:
- cran 289 last-month
- Total docker downloads: 21,154
- Total dependent packages: 1
- Total dependent repositories: 1
- Total versions: 4
- Total maintainers: 1
cran.r-project.org: CMF
Collective Matrix Factorization
- Documentation: http://cran.r-project.org/web/packages/CMF/CMF.pdf
- License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)]
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Latest release: 1.0.3
published over 3 years ago
Rankings
Maintainers (1)
Dependencies
- stats * imports