Data

Tools

Indexes

Applications

Experiments

Open Source Science

coca

R package for COCA: Cluster-of-Clusters Analysis

https://github.com/acabassi/coca

Science Score: 33.0%

This score indicates how likely this project is to be science-related based on various indicators:

  • ○
    CITATION.cff file
  • ○
    codemeta.json file
  • ○
    .zenodo.json file
  • ✓
    DOI references
    Found 3 DOI reference(s) in README
  • ✓
    Academic publication links
    Links to: zenodo.org
  • ✓
    Committers with academic emails
    1 of 1 committers (100.0%) from academic institutions
  • ○
    Institutional organization owner
  • ○
    JOSS paper metadata
  • ○
    Scientific vocabulary similarity
    Low similarity (5.3%) to scientific vocabulary

Keywords

cluster-analysis cluster-of-clusters clustering coca genomics integrative-clustering multi-omics
Last synced: 6 months ago · JSON representation

Repository

R package for COCA: Cluster-of-Clusters Analysis

Basic Info
Statistics
  • Stars: 6
  • Watchers: 0
  • Forks: 2
  • Open Issues: 0
  • Releases: 0
Topics
cluster-analysis cluster-of-clusters clustering coca genomics integrative-clustering multi-omics
Created over 7 years ago · Last pushed over 5 years ago
Metadata Files
Readme License

README.md

CRAN status Build Status DOI

R package for COCA: Cluster-of-Clusters Analysis

Installing

You can install the latest released version of coca from CRAN with R install.packages("coca") or the development version from GitHub with R library(devtools) install_github("acabassi/coca") library(coca)

Owner

  • Name: Alessandra Cabassi
  • Login: acabassi
  • Kind: user
  • Location: Zürich, Switzerland
  • Company: Google

Data scientist

GitHub Events

Total
Last Year

Committers

Last synced: about 2 years ago

All Time
  • Total Commits: 122
  • Total Committers: 1
  • Avg Commits per committer: 122.0
  • Development Distribution Score (DDS): 0.0
Past Year
  • Commits: 0
  • Committers: 0
  • Avg Commits per committer: 0.0
  • Development Distribution Score (DDS): 0.0
Top Committers
Name Email Commits
Alessandra Cabassi a****1@c****k 122
Committer Domains (Top 20 + Academic)
cam.ac.uk: 1

Issues and Pull Requests

Last synced: 7 months ago

All Time
  • Total issues: 0
  • Total pull requests: 4
  • Average time to close issues: N/A
  • Average time to close pull requests: less than a minute
  • Total issue authors: 0
  • Total pull request authors: 1
  • Average comments per issue: 0
  • Average comments per pull request: 0.0
  • Merged pull requests: 4
  • Bot issues: 0
  • Bot pull requests: 0
Past Year
  • Issues: 0
  • Pull requests: 0
  • Average time to close issues: N/A
  • Average time to close pull requests: N/A
  • Issue authors: 0
  • Pull request authors: 0
  • Average comments per issue: 0
  • Average comments per pull request: 0
  • Merged pull requests: 0
  • Bot issues: 0
  • Bot pull requests: 0
View more stats
Top Authors
Issue Authors
Pull Request Authors
  • acabassi (4)
Top Labels
Issue Labels
Pull Request Labels

Packages

  • Total packages: 1
  • Total downloads:
    • cran 283 last-month
  • Total dependent packages: 1
  • Total dependent repositories: 2
  • Total versions: 2
  • Total maintainers: 1
cran.r-project.org: coca

Cluster-of-Clusters Analysis

  • Versions: 2
  • Dependent Packages: 1
  • Dependent Repositories: 2
  • Downloads: 283 Last month
Rankings
Forks count: 17.0%
Dependent packages count: 18.1%
Dependent repos count: 19.3%
Average: 22.3%
Stargazers count: 23.6%
Downloads: 33.6%
Maintainers (1)
alessandra.cabassi@mrc-bsu.cam.ac.uk
Last synced: 6 months ago

Dependencies

DESCRIPTION cran
  • R >= 3.5.0 depends
  • Matrix * imports
  • RColorBrewer * imports
  • caret * imports
  • cluster * imports
  • fpc * imports
  • glmnet * imports
  • nnet * imports
  • pheatmap * imports
  • sparcl * imports
  • stats * imports
  • knitr * suggests
  • mclust * suggests
  • rmarkdown * suggests